RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 CPED1A4D0V7 1026 aa17.31■□□□□ 0.36
CNTNAP3-204ENST00000377656 NOS1APO75052 506 aaPredicted RBP17.31■□□□□ 0.36
CNTNAP3-204ENST00000377656 SP140Q13342 867 aa17.31■□□□□ 0.36
CNTNAP3-204ENST00000377656 TLR1Q15399 786 aa17.31■□□□□ 0.36
CNTNAP3-204ENST00000377656 SLC5A11Q8WWX8 675 aa17.31■□□□□ 0.36
CNTNAP3-204ENST00000377656 NEUROD4Q9HD90 331 aa17.31■□□□□ 0.36
CNTNAP3-204ENST00000377656 ZNF623O75123 536 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 GSTM3P21266 225 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 ACVR2AP27037 513 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 HOXC12P31275 282 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 PTPRCAPQ14761 206 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 CWF19L1Q69YN2 538 aaKnown RBP17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 RELL1Q8IUW5 271 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 PHTF2Q8N3S3 785 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 ZNF527Q8NB42 609 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 TNFAIP8L1Q8WVP5 186 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 DGAT2Q96PD7 388 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 PKP4Q99569 1192 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 ZBTB26Q9HCK0 441 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 ACTR3BQ9P1U1 418 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 DBIP07108 87 aaKnown RBP17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 GATMP50440 423 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 RPP38P78345 283 aaKnown RBP17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 EMX2Q04743 252 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 SATL1Q86VE3 508 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 C9orf43Q8TAL5 461 aaPredicted RBP17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 PSKH2Q96QS6 385 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 KCNS3Q9BQ31 491 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 TPT1P8Q9HAU6 139 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 TMLHEQ9NVH6 421 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 RGS17Q9UGC6 210 aaPredicted RBP17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 COCHO43405 550 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 GRID2O43424 1007 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 BCHEP06276 602 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 FMO3P31513 532 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 MLLT3P42568 568 aaPredicted RBP17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 ALDH3A2P51648 485 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 PCLAFQ15004 111 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 OR4E2Q8NGC2 313 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 OR51B5Q9H339 312 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 ANKRA2Q9H9E1 313 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 ROBO1Q9Y6N7 1651 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 PRSS51A0A1B0GVH4 220 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 PDLIM1O00151 329 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 DHPSP49366 369 aaPredicted RBP17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 RBBP4Q09028 425 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 SPANXN4Q5MJ08 99 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 SLC22A15Q8IZD6 547 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 TMBIM1Q969X1 311 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 ZNF641Q96N77 438 aaPredicted RBP17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 SMG9Q9H0W8 520 aaKnown RBP17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 PTTG2Q9NZH5 202 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 GABRQQ9UN88 632 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 PCDHB11Q9Y5F2 797 aa17.3■□□□□ 0.36
CNTNAP3-204ENST00000377656 FAM172BPA6NC97 362 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 MATN2O00339 956 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 CYB5AP00167 134 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 HLA-EP13747 358 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 CSTF2P33240 577 aaKnown RBP eCLIP17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 RAB8AP61006 207 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 ZFP69Q49AA0 526 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 CLEC12AQ5QGZ9 265 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 CEACAM20Q6UY09 585 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 OR9A1PQ8NGU1 263 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 POPDC3Q9HBV1 291 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 CFL2Q9Y281 166 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 RNF11Q9Y3C5 154 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 SPIN1Q9Y657 262 aaPredicted RBP17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 C9J4A7 227 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 CXCR1P25024 350 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 IGDCC3Q8IVU1 814 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 IL4I1Q96RQ9 567 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 TUBGCP5Q96RT8 1024 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 CD244Q9BZW8 370 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 BHLHE41Q9C0J9 482 aaPredicted RBP17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 C1orf21Q9H246 121 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 SERINC1Q9NRX5 453 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 SNTG1Q9NSN8 517 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 POFUT2Q9Y2G5 429 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 TMEM98Q9Y2Y6 226 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 ENPP2Q13822 863 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 KIAA1161Q6NSJ0 714 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 UMODL1-AS1Q8N2C9 162 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 OR2AJ1Q8NGZ0 328 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 SLC25A36Q96CQ1 311 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 SHDQ96IW2 340 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 CLCC1Q96S66 551 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 RIMKLBQ9ULI2 386 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 A0A075B6Q4 140 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 A8MUA0 341 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 ZNF879B4DU55 563 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 VLDLRP98155 873 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 TIGD6Q17RP2 521 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 ZNF783Q6ZMS7 281 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 TICAM1Q8IUC6 712 aa17.29■□□□□ 0.36
CNTNAP3-204ENST00000377656 EFCAB9A8MZ26 197 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 CPNE3O75131 537 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 ACADLP28330 430 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 TSPAN5P62079 268 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 TMEM115Q12893 351 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 494.9 ms