RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 GPRC5BQ9NZH0 403 aa19.07■□□□□ 0.64
DDR1-228ENST00000376575 EMCNQ9ULC0 261 aa19.07■□□□□ 0.64
DDR1-228ENST00000376575 TMCO1Q9UM00 188 aa19.07■□□□□ 0.64
DDR1-228ENST00000376575 PCDHB3Q9Y5E6 796 aa19.07■□□□□ 0.64
DDR1-228ENST00000376575 KCNE2Q9Y6J6 123 aa19.07■□□□□ 0.64
DDR1-228ENST00000376575 URB1O60287 2271 aaKnown RBP19.06■□□□□ 0.64
DDR1-228ENST00000376575 KCNE1BA0A087WTH5 132 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 FITM1A5D6W6 292 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 TAF4O00268 1085 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 WDR47O94967 919 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 CDH1P12830 882 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 H2AFXP16104 143 aaPredicted RBP19.06■□□□□ 0.64
DDR1-228ENST00000376575 ZNF28P17035 718 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 KRT4P19013 534 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 AGTR2P50052 363 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 ITGA1P56199 1179 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 PFKFB4Q16877 469 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 DEFB110Q30KQ9 67 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 FBXO48Q5FWF7 155 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 LRRC70Q7Z2Q7 622 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 EXT2Q93063 718 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 ESAMQ96AP7 390 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 ALKBH8Q96BT7 664 aaKnown RBP19.06■□□□□ 0.64
DDR1-228ENST00000376575 TSNARE1Q96NA8 513 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 ZFYVE21Q9BQ24 234 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 DNAJC11Q9NVH1 559 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 SERTAD3Q9UJW9 196 aa19.06■□□□□ 0.64
DDR1-228ENST00000376575 STX16-NPEPL1H3BU86 382 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 STX16O14662 325 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 HAT1O14929 419 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 GLRA3O75311 464 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 S100BP04271 92 aaPredicted RBP19.05■□□□□ 0.64
DDR1-228ENST00000376575 CCR8P51685 355 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 NFKB2Q00653 900 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 CDC16Q13042 620 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 MAP7Q14244 749 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 CATSPEREQ5SY80 951 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 FRMPD2BQ6IN97 320 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 NXPE4Q6UWF7 544 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 SLCO4C1Q6ZQN7 724 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 PROSER1Q86XN7 944 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 WDR34Q96EX3 536 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 SCYL1Q96KG9 808 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 C1QTNF3Q9BXJ4 246 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 CAPS2Q9BXY5 557 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 SPRTNQ9H040 489 aaPredicted RBP19.05■□□□□ 0.64
DDR1-228ENST00000376575 EHD1Q9H4M9 534 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 PELI2Q9HAT8 420 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 CPSF2Q9P2I0 782 aaKnown RBP19.05■□□□□ 0.64
DDR1-228ENST00000376575 COPG2Q9UBF2 871 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 SSUH2Q9Y2M2 353 aa19.05■□□□□ 0.64
DDR1-228ENST00000376575 LOC105369274A0A096LPK9 316 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 LOC102723532A0A0G2JNH3 316 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 K7EPI3 171 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 PRAMEF4O60810 478 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 STK17BO94768 372 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 GFAPP14136 432 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 GNAZP19086 355 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 CCT5P48643 541 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 PCBP4P57723 403 aaKnown RBP19.04■□□□□ 0.64
DDR1-228ENST00000376575 KRT71Q3SY84 523 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 TCTE1Q5JU00 501 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 PRAMEF17Q5VTA0 474 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 PRAMEF9Q5VWM5 478 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 C16orf46Q6P387 395 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 TLDC1Q6P9B6 456 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 ZNF517Q6ZMY9 492 aaPredicted RBP19.04■□□□□ 0.64
DDR1-228ENST00000376575 TIPARPQ7Z3E1 657 aaKnown RBP19.04■□□□□ 0.64
DDR1-228ENST00000376575 CROCCP2Q86T23 111 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 OR4N4Q8N0Y3 316 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 ARHGEF39Q8N4T4 335 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 BANPQ8N9N5 519 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 SLC38A9Q8NBW4 561 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 THAP11Q96EK4 314 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 LRFN5Q96NI6 719 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 DYRK1BQ9Y463 629 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 TNPO3Q9Y5L0 923 aaKnown RBP19.04■□□□□ 0.64
DDR1-228ENST00000376575 FER1L5A0AVI2 2057 aa19.04■□□□□ 0.64
DDR1-228ENST00000376575 A0A0J9YVX5 310 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 E7EQ34 232 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 H0YGG7 62 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 STMND1H3BQB6 276 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 E2F3O00716 465 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 SCRG1O75711 98 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 OR2B3O76000 313 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 CASP2P42575 452 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 ARF3P61204 181 aaPredicted RBP19.03■□□□□ 0.64
DDR1-228ENST00000376575 RPS15AP62244 130 aaKnown RBP19.03■□□□□ 0.64
DDR1-228ENST00000376575 TBCCQ15814 346 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 PDK4Q16654 411 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 PRTGQ2VWP7 1150 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 CEP85LQ5SZL2 805 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 ATG9BQ674R7 924 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 ZFAND4Q86XD8 727 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 C4orf33Q8N1A6 199 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 PTGR2Q8N8N7 351 aaPredicted RBP19.03■□□□□ 0.64
DDR1-228ENST00000376575 TM4SF19Q96DZ7 209 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 PGM2Q96G03 612 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 SELENOSQ9BQE4 189 aa19.03■□□□□ 0.64
DDR1-228ENST00000376575 ULBP3Q9BZM4 244 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms