RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 USP39Q53GS9 565 aaKnown RBP11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 OVOS1Q6IE37 1185 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 FAM180BQ6P0A1 224 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 TMC5Q6UXY8 1006 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 SPATA2LQ8IUW3 424 aaPredicted RBP11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 BEND7Q8N7W2 519 aaPredicted RBP11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 LPCAT1Q8NF37 534 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 OR7D4Q8NG98 312 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 FATE1Q969F0 183 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 APOL5Q9BWW9 433 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 NXF2Q9GZY0 626 aaKnown RBP11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 RUBCNLQ9H714 662 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 GPR83Q9NYM4 423 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 ZNF221Q9UK13 617 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 PPT2Q9UMR5 302 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 ST3GAL5Q9UNP4 418 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 SNX8Q9Y5X2 465 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 GREB1Q4ZG55 1949 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 H3BQ06 376 aaPredicted RBP11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 CYP7B1O75881 506 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 ADRA2AP08913 450 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 CTSHP09668 335 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 GRK4P32298 578 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 HTR3AP46098 478 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 FAM214AQ32MH5 1076 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 OR8H2Q8N162 312 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 GPRC5AQ8NFJ5 357 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 LKAAEAR1Q8TD35 194 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 EGLN2Q96KS0 407 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 TSSK3Q96PN8 268 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 PDFQ9HBH1 243 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 LRTM1Q9HBL6 345 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 TM9SF3Q9HD45 589 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 TMEM184CQ9NVA4 438 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 NUDT4Q9NZJ9 180 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 TBC1D24Q9ULP9 559 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 SLC6A14Q9UN76 642 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 GABRQQ9UN88 632 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 KCNH4Q9UQ05 1017 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 LOC730098B7Z3J9 87 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 RGS14O43566 566 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 OTCP00480 354 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 PTHP01270 115 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 HSMCR30P0CW71 290 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 DNAJA1P31689 397 aaKnown RBP11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 GNPDA1P46926 289 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 PROX2Q3B8N5 592 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 SLC39A12Q504Y0 691 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 TUBA3EQ6PEY2 450 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 NRARPQ7Z6K4 114 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 METTL23Q86XA0 190 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 NXPE3Q969Y0 559 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 TTYH2Q9BSA4 534 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 TRIM62Q9BVG3 475 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 SCPEP1Q9HB40 452 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 PARVBQ9HBI1 364 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 RAD18Q9NS91 495 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 HSPE1-MOB4S4R3N1 261 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 IGLV3-10A0A075B6K4 115 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 MOXD2PA6NHM9 499 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 PDZK1P1A8MUH7 402 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 EPOP01588 193 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 STSP08842 583 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 HOXB9P17482 250 aaPredicted RBP11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 B2MP61769 119 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 PRKCDQ05655 676 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 CCDC58Q4VC31 144 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 SNAP47Q5SQN1 464 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 SLC46A3Q7Z3Q1 461 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 HORMAD1Q86X24 394 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 CYP4Z2PQ8N1L4 340 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 TTC9BQ8N6N2 239 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 GGHQ92820 318 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 ANKHQ9HCJ1 492 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 CCNB1IP1Q9NPC3 277 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 THUMPD1Q9NXG2 353 aaKnown RBP11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 ERVW-1Q9UQF0 538 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 GPSM3Q9Y4H4 160 aa11.16□□□□□ -0.62
TM9SF2-201ENST00000376387 SEMA3DO95025 777 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 PRAMEF12O95522 483 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 PSEN2P49810 448 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 ARHGDIAP52565 204 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 ZNF45Q02386 682 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 CAMK2GQ13555 558 aaPredicted RBP11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 ZMAT1Q5H9K5 638 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 NADSYN1Q6IA69 706 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 PDE12Q6L8Q7 609 aaKnown RBP11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 RASAL3Q86YV0 1011 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 UBQLNLQ8IYU4 475 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 NUAK2Q9H093 628 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 SYNDIG1Q9H7V2 258 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 PRR23AA6NEV1 266 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 ULK1O75385 1050 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 GLUD1P00367 558 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 FABP3P05413 133 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 CHRNB1P11230 501 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 PRKCAP17252 672 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 FPR1P21462 350 aa11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 TAF1AQ15573 450 aaPredicted RBP11.15□□□□□ -0.62
TM9SF2-201ENST00000376387 LRRC26Q2I0M4 334 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms