RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 HOXC13P31276 330 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MLLT10P55197 1068 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ADARB1P78563 741 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TIAL1Q01085 375 aaKnown RBP eCLIP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 HSPB3Q12988 150 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CAMK2GQ13555 558 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TYSND1Q2T9J0 566 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GPRC6AQ5T6X5 926 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ADNP2Q6IQ32 1131 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 BBS7Q8IWZ6 715 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DTX3Q8N9I9 347 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GLB1L3Q8NCI6 653 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 XAGE5Q8WWM1 108 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 S100ZQ8WXG8 99 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RHBDF1Q96CC6 855 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 VPS29Q9UBQ0 182 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 NEU3Q9UQ49 428 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MED16Q9Y2X0 877 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 YIPF1Q9Y548 306 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TCRBV5S2A0A599 114 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CSF2P04141 144 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GADD45AP24522 165 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DNAJA1P31689 397 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RAB25P57735 213 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ARMCX4Q5H9R4 360 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 EIF3MQ7L2H7 374 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MRPL10Q7Z7H8 261 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ELMOD1Q8N336 334 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 OR9Q2Q8NGE9 314 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 OR8J3Q8NGG0 315 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TRUB1Q8WWH5 349 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 POPDC3Q9HBV1 291 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 B4GALT6Q9UBX8 382 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PLAGL1Q9UM63 463 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 KCNE2Q9Y6J6 123 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ACPPP15309 386 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SDC1P18827 310 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ABHD18Q0P651 414 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ILF2Q12905 390 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CBX2Q14781 532 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SETMARQ53H47 684 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SPATC1Q76KD6 591 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 C10orf111Q8N326 155 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 LILRA3Q8N6C8 439 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 NFKBIDQ8NI38 313 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PIH1D2Q8WWB5 315 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 KAT2AQ92830 837 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CDK5RAP1Q96SZ6 601 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CSF3RQ99062 836 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 C8orf4Q9NR00 106 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 WDR81Q562E7 1941 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 EOMESO95936 686 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 HIST2H2ACQ16777 129 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 HIST2H2AA3Q6FI13 130 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 C11orf65Q8NCR3 313 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GPR150Q8NGU9 434 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 EXOSC8Q96B26 276 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 YME1L1Q96TA2 773 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 FAM83DQ9H4H8 585 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GIMAP4Q9NUV9 329 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DNAJC27Q9NZQ0 273 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TAPBPO15533 448 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 EBLN1P0CF75 366 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CD70P32970 193 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MC1RQ01726 317 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TSTQ16762 297 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 VMACQ2NL98 169 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ADPRMQ3LIE5 342 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TPRG1LQ5T0D9 272 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 NIPAL1Q6NVV3 410 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CASP12Q6UXS9 341 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DPY19L3Q6ZPD9 716 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TP53INP1Q96A56 240 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PPCDCQ96CD2 204 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 UHRF1Q96T88 793 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 OR51E2Q9H255 320 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ACTL8Q9H568 366 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TIGARQ9NQ88 270 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 VNN3Q9NY84 501 aa13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 INTS6Q9UL03 887 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SLC35F4A4IF30 521 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RTCAO00442 366 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CCL16O15467 120 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CCNDBP1O95273 360 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CLCN7P51798 805 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PTPN5P54829 565 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RPS13P62277 151 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 KIAA1614Q5VZ46 1190 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 B3GNT8Q7Z7M8 397 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TEX26Q8N6G2 289 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TSPEARQ8WU66 669 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CLP1Q92989 425 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 COL26A1Q96A83 441 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RIOK2Q9BVS4 552 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 EQTNQ9NQ60 294 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ASF1AQ9Y294 204 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MGAMO43451 1857 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DRGXA6NNA5 263 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 FAM227AF5H4B4 570 aa13.93□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TMCC2O75069 709 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms