RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 FAM45BPQ6NSW5 357 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 RHBDD2Q6NTF9 364 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 EMBQ6PCB8 327 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 PAQR3Q6TCH7 311 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 CYHR1Q6ZMK1 362 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 CUZD1Q86UP6 607 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 ZGRF1Q86YA3 2104 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 SRRM1Q8IYB3 904 aaKnown RBP11.67□□□□□ -0.54
LSM2-208ENST00000375661 OR2Y1Q8NGV0 311 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 FAM45AQ8TCE6 357 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 PPP4R1Q8TF05 950 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 SLC44A1Q8WWI5 657 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 TFGQ92734 400 aaPredicted RBP11.67□□□□□ -0.54
LSM2-208ENST00000375661 INPP5DQ92835 1189 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 CAVIN3Q969G5 261 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 PTERQ96BW5 349 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 MRRFQ96E11 262 aaKnown RBP11.67□□□□□ -0.54
LSM2-208ENST00000375661 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 FERD3LQ96RJ6 166 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 RUBCNLQ9H714 662 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 MVB12BQ9H7P6 319 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 ATP13A2Q9NQ11 1180 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 P4HTMQ9NXG6 502 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 NDOR1Q9UHB4 597 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 SRPK3Q9UPE1 567 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 PTRH2Q9Y3E5 179 aaKnown RBP11.67□□□□□ -0.54
LSM2-208ENST00000375661 TEP1Q99973 2627 aaKnown RBP11.67□□□□□ -0.54
LSM2-208ENST00000375661 HMX2A2RU54 273 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 H3BMH7 237 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 IFRD1O00458 451 aaPredicted RBP11.66□□□□□ -0.54
LSM2-208ENST00000375661 BTN3A3O00478 584 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 TUBBP07437 444 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 EDN3P14138 238 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 GCAP28676 217 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 SPRP35270 261 aaPredicted RBP11.66□□□□□ -0.54
LSM2-208ENST00000375661 TSFMP43897 325 aaKnown RBP11.66□□□□□ -0.54
LSM2-208ENST00000375661 RIPPLY3P57055 190 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 TAS2R39P59534 338 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 DCDP81605 110 aaKnown RBP11.66□□□□□ -0.54
LSM2-208ENST00000375661 AIMP2Q13155 320 aaKnown RBP11.66□□□□□ -0.54
LSM2-208ENST00000375661 TMED2Q15363 201 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 ZRSR2Q15696 482 aaKnown RBP11.66□□□□□ -0.54
LSM2-208ENST00000375661 KLHL38Q2WGJ6 581 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 MLIPQ5VWP3 458 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 TMEM207Q6UWW9 146 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 CDHR3Q6ZTQ4 885 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 AMIGO1Q86WK6 493 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 CEP97Q8IW35 865 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 CPNE9Q8IYJ1 553 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 PHC3Q8NDX5 983 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 N4BP2L2Q92802 583 aaPredicted RBP11.66□□□□□ -0.54
LSM2-208ENST00000375661 MARVELD3Q96A59 401 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 GBP5Q96PP8 586 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 GPR22Q99680 433 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 WDR77Q9BQA1 342 aaPredicted RBP11.66□□□□□ -0.54
LSM2-208ENST00000375661 TAS2R13Q9NYV9 303 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 TXNDC16Q9P2K2 825 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 TRMT6Q9UJA5 497 aaKnown RBP11.66□□□□□ -0.54
LSM2-208ENST00000375661 NTNG1Q9Y2I2 539 aa11.66□□□□□ -0.54
LSM2-208ENST00000375661 LRBAP50851 2863 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 POC1B-GALNT4F8VUJ3 575 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 AGPSO00116 658 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 OR2B3O76000 313 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 WISP3O95389 354 aaPredicted RBP11.65□□□□□ -0.54
LSM2-208ENST00000375661 TSPAN12O95859 305 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 SHBGP04278 402 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 CBSLP0DN79 551 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 SAT1P21673 171 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 ITGA3P26006 1051 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 ATP5DP30049 168 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 CBSP35520 551 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 HSD17B3P37058 310 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 SKIV2L2P42285 1042 aaKnown RBP11.65□□□□□ -0.54
LSM2-208ENST00000375661 ILF2Q12905 390 aaKnown RBP11.65□□□□□ -0.54
LSM2-208ENST00000375661 BMPR2Q13873 1038 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 ZNF460Q14592 562 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 CYP2A13Q16696 494 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 B3GNTL1Q67FW5 361 aaPredicted RBP11.65□□□□□ -0.54
LSM2-208ENST00000375661 UGT3A1Q6NUS8 523 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 MRPL14Q6P1L8 145 aaKnown RBP11.65□□□□□ -0.54
LSM2-208ENST00000375661 TLDC1Q6P9B6 456 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 SPESP1Q6UW49 350 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 IGFL2Q6UWQ7 119 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 PPP1R32Q7Z5V6 425 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 C19orf47Q8N9M1 422 aaKnown RBP11.65□□□□□ -0.54
LSM2-208ENST00000375661 OR52E1Q8NGJ3 308 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 DCAKDQ8WVC6 231 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 UBLCP1Q8WVY7 318 aaPredicted RBP11.65□□□□□ -0.54
LSM2-208ENST00000375661 PAFAH2Q99487 392 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 CAB39LQ9H9S4 337 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 ACTR10Q9NZ32 417 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 IFT80Q9P2H3 777 aaPredicted RBP11.65□□□□□ -0.54
LSM2-208ENST00000375661 TSR3Q9UJK0 312 aaKnown RBP11.65□□□□□ -0.54
LSM2-208ENST00000375661 SLC39A10Q9ULF5 831 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 RUVBL2Q9Y230 463 aaKnown RBP11.65□□□□□ -0.54
LSM2-208ENST00000375661 NFS1Q9Y697 457 aa11.65□□□□□ -0.54
LSM2-208ENST00000375661 SNRNP200O75643 2136 aaKnown RBP11.65□□□□□ -0.55
LSM2-208ENST00000375661 A0A1B0GUH1 482 aa11.64□□□□□ -0.55
LSM2-208ENST00000375661 EXOC1LA0A1B0GW35 172 aa11.64□□□□□ -0.55
LSM2-208ENST00000375661 E2F3O00716 465 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms