RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 KIAA0319Q5VV43 1072 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 LRRTM3Q86VH5 581 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 OXR1Q8N573 874 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 OR8H1Q8NGG4 311 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZDHHC3Q9NYG2 299 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SLAMF8Q9P0V8 285 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF282Q9UDV7 671 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 PCTPQ9UKL6 214 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 OARD1Q9Y530 152 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 TRBC2A0A5B9 178 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CH25HO95992 272 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 MT-ND2P03891 347 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 RFC2P35250 354 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ERVPABLB-1P60509 514 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SCN1BQ07699 218 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 C9orf64Q5T6V5 341 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 FAM91A1Q658Y4 838 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 LETMD1Q6P1Q0 360 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 HACD2Q6Y1H2 254 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CCDC80Q76M96 950 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CHMP1BQ7LBR1 199 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 RGL4Q8IZJ4 473 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CD99L2Q8TCZ2 262 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 GRHL3Q8TE85 626 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 MRPL48Q96GC5 212 aaKnown RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SLITRK2Q9H156 845 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 TMEM138Q9NPI0 162 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ERVK13-1Q9NX77 482 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 NDOR1Q9UHB4 597 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 GPC6Q9Y625 555 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 QSER1Q2KHR3 1735 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CPSF4LA6NMK7 179 aaKnown RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 AP3D1O14617 1153 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 COCHO43405 550 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 MPZL2O60487 215 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CDRT1O95170 752 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 PAPSS2O95340 614 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 MLLT6P55198 1093 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SCAPQ12770 1279 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 HEPACAMQ14CZ8 416 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SPCS2Q15005 226 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 HMBOX1Q6NT76 420 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CXXC5Q7LFL8 322 aaKnown RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 PHYKPLQ8IUZ5 450 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 MFSD6LQ8IWD5 586 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 LSMEM2Q8N112 164 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 MINDY1Q8N5J2 469 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 TMEM125Q96AQ2 219 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 AIF1LQ9BQI0 150 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 OCEL1Q9H607 264 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF232Q9UNY5 417 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 POFUT2Q9Y2G5 429 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 UBR3Q6ZT12 1888 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 C7orf72A4D263 438 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CCRL2O00421 344 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SLC30A4O14863 429 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 OR10H2O60403 315 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CCNDBP1O95273 360 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SAGP10523 405 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CD247P20963 164 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 DPP6P42658 865 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 FPGSQ05932 587 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 LRP8Q14114 963 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 NDUFAF6Q330K2 333 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 FRG2Q64ET8 278 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 LCN8Q6JVE9 175 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 POMZP3Q6PJE2 187 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SUSD1Q6UWL2 747 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF517Q6ZMY9 492 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 Q6ZVU0 165 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SCML4Q8N228 414 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 FCGR1BQ92637 280 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 FUBP1Q96AE4 644 aaKnown RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CMTM7Q96FZ5 175 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SLC35G5Q96KT7 338 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 FRG2BQ96QU4 278 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 C2orf78A6NCI8 922 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 MAGEA6P43360 314 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 NFATC3Q12968 1075 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 HNRNPA0Q13151 305 aaKnown RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 CRHR2Q13324 411 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 DSC3Q14574 896 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 C6orf141Q5SZD1 244 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 BRINP2Q9C0B6 783 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 POPDC3Q9HBV1 291 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 TBCCD1Q9NVR7 557 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 ILVBLA1L0T0 632 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 SH3PXD2BA1X283 911 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 K7ERQ8 282 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 SMIM18P0DKX4 95 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 GSTM2P28161 218 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 HTR6P50406 440 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 RGS1Q08116 209 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 PTPRRQ15256 657 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF438Q7Z4V0 828 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 TMEM174Q8WUU8 243 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 TUBA1CQ9BQE3 449 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 SPO11Q9Y5K1 396 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 COL11A1P12107 1806 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 COL11A2P13942 1736 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms