RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 POLR2JP52435 117 aaKnown RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 CDH13P55290 713 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 ERVFC1P60507 584 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 DAB2P98082 770 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 SCN1BQ07699 218 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 SMARCB1Q12824 385 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 KCTD11Q693B1 232 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 ENPP6Q6UWR7 440 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 DNAJB7Q7Z6W7 309 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 ARL14EPQ8N8R7 260 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 OR8H1Q8NGG4 311 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 DNAJA4Q8WW22 397 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 IGSF8Q969P0 613 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 SERPINB11Q96P15 392 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 TCF25Q9BQ70 676 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 TRAF4Q9BUZ4 470 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 TTLL2Q9BWV7 592 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 SLC39A8Q9C0K1 460 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 ERVMER34-1Q9H9K5 563 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 MID1IP1Q9NPA3 183 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 POLG2Q9UHN1 485 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 DCLK1O15075 740 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 CCL16O15467 120 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 PMPCBO75439 489 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 MT-CYBP00156 380 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 CYBBP04839 570 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 CBX5P45973 191 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 DIO3P55073 304 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 RPS24P62847 133 aaKnown RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 RHAGQ02094 409 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 NAPEPLDQ6IQ20 393 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 ARSKQ6UWY0 536 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 KIF18BQ86Y91 864 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 HS6ST3Q8IZP7 471 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 MSANTD3Q96H12 275 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 ACOX2Q99424 681 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 GTPBP2Q9BX10 602 aaKnown RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 HDHD5Q9BXW7 423 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 IL23AQ9NPF7 189 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 ING3Q9NXR8 418 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 TLR6Q9Y2C9 796 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 LINC00032P0C843 101 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 CYP4B1P13584 511 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 SH3BP2P78314 561 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 GALEQ14376 348 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 SMN1Q16637 294 aaKnown RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 UNC50Q53HI1 259 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 CLVS2Q5SYC1 327 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 LAIR1Q6GTX8 287 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 TIGD7Q6NT04 549 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 FBXL22Q6P050 247 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 TRIM48Q8IWZ4 208 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 FAM86B1Q8N7N1 296 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 MAGEB10Q96LZ2 347 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 GORASP2Q9H8Y8 452 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 HCFC1R1Q9NWW0 138 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 ADGRE2Q9UHX3 823 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 ARPC4-TTLL3A0A0A6YYG9 625 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 A0A0U1RQS6 177 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 M0R082 166 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 TOR1AO14656 332 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 MITFO75030 526 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-203ENST00000375315 GJB3O75712 270 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 CYP7B1O75881 506 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 TNNI3P19429 210 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 NFKB1P19838 968 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 TNFSF8P32971 234 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 CSNK2BP67870 215 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 ELP6Q0PNE2 266 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 MAD2L1BPQ15013 274 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-203ENST00000375315 QPRTQ15274 297 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 SHEQ5VZ18 495 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 RAB44Q7Z6P3 723 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-203ENST00000375315 ATPAF2Q8N5M1 289 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 PNPLA1Q8N8W4 532 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 OR4M2Q8NGB6 313 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 ASB15Q8WXK1 588 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 TSPAN17Q96FV3 270 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 EXOC2Q96KP1 924 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 KCNS3Q9BQ31 491 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 CHCHD6Q9BRQ6 235 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 BBS2Q9BXC9 721 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 RNF121Q9H920 327 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 CARS2Q9HA77 564 aaKnown RBP11.79□□□□□ -0.52
C9orf3-203ENST00000375315 SCPEP1Q9HB40 452 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 AIG1Q9NVV5 245 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 FBXO10Q9UK96 956 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 PKP3Q9Y446 797 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 J3KR12 359 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 BTN3A3O00478 584 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 RGS5O15539 181 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 COCHO43405 550 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 CRCPO75575 148 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 PDE9AO76083 593 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 CKMP06732 381 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 POU3F3P20264 500 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-203ENST00000375315 KRT20P35900 424 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 ATP5C1P36542 298 aaKnown RBP11.79□□□□□ -0.52
C9orf3-203ENST00000375315 SOX9P48436 509 aa11.79□□□□□ -0.52
C9orf3-203ENST00000375315 MTPNP58546 118 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms