RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 BTBD16Q32M84 506 aa16.48■□□□□ 0.23
H2AFX-201ENST00000375167 PODNL1Q6PEZ8 512 aa16.48■□□□□ 0.23
H2AFX-201ENST00000375167 GLT6D1Q7Z4J2 308 aa16.48■□□□□ 0.23
H2AFX-201ENST00000375167 KRT35Q92764 455 aa16.48■□□□□ 0.23
H2AFX-201ENST00000375167 ZNF285Q96NJ3 590 aa16.48■□□□□ 0.23
H2AFX-201ENST00000375167 YIPF2Q9BWQ6 316 aa16.48■□□□□ 0.23
H2AFX-201ENST00000375167 HACD3Q9P035 362 aa16.48■□□□□ 0.23
H2AFX-201ENST00000375167 TRPC4Q9UBN4 977 aa16.48■□□□□ 0.23
H2AFX-201ENST00000375167 POLG2Q9UHN1 485 aa16.48■□□□□ 0.23
H2AFX-201ENST00000375167 TDRKHQ9Y2W6 561 aaKnown RBP16.48■□□□□ 0.23
H2AFX-201ENST00000375167 PRPF4O43172 522 aaKnown RBP eCLIP16.47■□□□□ 0.23
H2AFX-201ENST00000375167 KDM1AO60341 852 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 CTNNA2P26232 953 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 PEBP1P30086 187 aaKnown RBP16.47■□□□□ 0.23
H2AFX-201ENST00000375167 GRIA3P42263 894 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 ZFP36L2P47974 494 aaKnown RBP16.47■□□□□ 0.23
H2AFX-201ENST00000375167 ST13P50502 369 aaKnown RBP16.47■□□□□ 0.23
H2AFX-201ENST00000375167 CBLBQ13191 982 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 SLC25A35Q3KQZ1 300 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 H3F3CQ6NXT2 135 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 PEX26Q7Z412 305 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 CRLF3Q8IUI8 442 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 AMER2Q8N7J2 671 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 POGLUT1Q8NBL1 392 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 Q96MF0 132 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 SLC25A51Q9H1U9 297 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 KCNK13Q9HB14 408 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.47■□□□□ 0.23
H2AFX-201ENST00000375167 AMFRQ9UKV5 643 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 ASF1AQ9Y294 204 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 HEY1Q9Y5J3 304 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 FAM169AQ9Y6X4 670 aa16.47■□□□□ 0.23
H2AFX-201ENST00000375167 GABRR3A8MPY1 467 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 CFAP99D6REC4 459 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 BUD23O43709 281 aaKnown RBP16.46■□□□□ 0.23
H2AFX-201ENST00000375167 NME2P1O60361 137 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 SLC25A12O75746 678 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 NEURL1O76050 574 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 SEC24DO94855 1032 aaPredicted RBP16.46■□□□□ 0.23
H2AFX-201ENST00000375167 CD53P19397 219 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 NME2P22392 152 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 TNNT3P45378 269 aaPredicted RBP16.46■□□□□ 0.23
H2AFX-201ENST00000375167 NR2C2P49116 596 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 VSX2P58304 361 aaPredicted RBP16.46■□□□□ 0.23
H2AFX-201ENST00000375167 COPS2P61201 443 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 PDK1Q15118 436 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 WASHC2DQ5SRD0 308 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 PLAG1Q6DJT9 500 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 ARHGAP11AQ6P4F7 1023 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 ZNF662Q6ZS27 426 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 CCDC50Q8IVM0 306 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 TADA1Q96BN2 335 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 CEP41Q9BYV8 373 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 GUCA1BQ9UMX6 200 aa16.46■□□□□ 0.23
H2AFX-201ENST00000375167 hCG_1818297A0A087WSY0 165 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 MIF4GDA9UHW6 222 aaKnown RBP16.45■□□□□ 0.22
H2AFX-201ENST00000375167 CST8O60676 142 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 MED26O95402 600 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 TFEBP19484 476 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 UQCRC1P31930 480 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 RWDD2BP57060 319 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 DYNLT1P63172 113 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 NOMO1Q15155 1222 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 MUM1Q2TAK8 710 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 KAZNQ674X7 775 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 TMEM205Q6UW68 189 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 BZW1Q7L1Q6 419 aaKnown RBP16.45■□□□□ 0.22
H2AFX-201ENST00000375167 TBC1D21Q8IYX1 336 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 SPATA22Q8NHS9 363 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 BLOC1S5Q8TDH9 187 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 OLFM3Q96PB7 478 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 ASB8Q9H765 288 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 PLEKHF2Q9H8W4 249 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 CRLS1Q9UJA2 301 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 PLAGL1Q9UM63 463 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 CDC14AQ9UNH5 594 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 EFR3BQ9Y2G0 817 aa16.45■□□□□ 0.22
H2AFX-201ENST00000375167 ARID1AO14497 2285 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 FFAR3O14843 346 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 STX7O15400 261 aaKnown RBP16.44■□□□□ 0.22
H2AFX-201ENST00000375167 GPR42O15529 346 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 ZSCAN12O43309 604 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 SRPX2O60687 465 aaPredicted RBP16.44■□□□□ 0.22
H2AFX-201ENST00000375167 C8orf89P0DMQ9 161 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 BMP7P18075 431 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 PPIDQ08752 370 aaKnown RBP16.44■□□□□ 0.22
H2AFX-201ENST00000375167 DAZAP2Q15038 168 aaPredicted RBP16.44■□□□□ 0.22
H2AFX-201ENST00000375167 NPNTQ6UXI9 565 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 CAPN12Q6ZSI9 719 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 WDR53Q7Z5U6 358 aaPredicted RBP16.44■□□□□ 0.22
H2AFX-201ENST00000375167 VWA5B2Q8N398 1253 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 UBL4BQ8N7F7 174 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 METTL21AQ8WXB1 218 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 ALG3Q92685 438 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 SLC22A18Q96BI1 424 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 CAPN6Q9Y6Q1 641 aa16.44■□□□□ 0.22
H2AFX-201ENST00000375167 PPP1R12AO14974 1030 aaPredicted RBP16.43■□□□□ 0.22
H2AFX-201ENST00000375167 FTCDO95954 541 aa16.43■□□□□ 0.22
H2AFX-201ENST00000375167 ATP1B2P14415 290 aaPredicted RBP16.43■□□□□ 0.22
H2AFX-201ENST00000375167 PTPN7P35236 360 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms