RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 AGTR2P50052 363 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 CCR8P51685 355 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 CSNK1G2P78368 415 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 NFKB2Q00653 900 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 FOXK2Q01167 660 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 FOXM1Q08050 763 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 TUBB3Q13509 450 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 E2F2Q14209 437 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 KCNAB1Q14722 419 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 GPR19Q15760 415 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.9□□□□□ -0.66
HSPG2-202ENST00000374676 FBXO48Q5FWF7 155 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 DCAF12Q5T6F0 453 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 TMEM164Q5U3C3 297 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 FOXR1Q6PIV2 292 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 NXPE4Q6UWF7 544 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 RNF44Q7L0R7 432 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 SLC22A9Q8IVM8 553 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 MCATQ8IVS2 390 aaKnown RBP10.9□□□□□ -0.66
HSPG2-202ENST00000374676 RDH11Q8TC12 318 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 USP7Q93009 1102 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 NEIL2Q969S2 332 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 PHF21BQ96EK2 531 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 THAP11Q96EK4 314 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 WDR34Q96EX3 536 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 ZNF285Q96NJ3 590 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 ZFYVE21Q9BQ24 234 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 IQCGQ9H095 443 aaKnown RBP10.9□□□□□ -0.66
HSPG2-202ENST00000374676 CENPHQ9H3R5 247 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 EHD1Q9H4M9 534 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 FANCEQ9HB96 536 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 ASCL3Q9NQ33 180 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 OPTCQ9UBM4 332 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 DKK4Q9UBT3 224 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 SERTAD3Q9UJW9 196 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 ASB1Q9Y576 335 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 AK5Q9Y6K8 562 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 SDK2Q58EX2 2172 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 KCNE1BA0A087WTH5 132 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 GOLGA6L10A6NI86 522 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 TMEM150CB9EJG8 249 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 C9orf172C9J069 976 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 G3V2L1 256 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 H3BMH7 237 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 CLGNO14967 610 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 HCRTR1O43613 425 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 C1GALT1C1LP0DN25 315 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 EZRP15311 586 aaKnown RBP10.89□□□□□ -0.67
HSPG2-202ENST00000374676 EPB42P16452 691 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 CXCR2P25025 360 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 GRK3P35626 688 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 PIK3CGP48736 1102 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 PRKAA2P54646 552 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 ERVPABLB-1P60509 514 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 TBCCQ15814 346 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 PDK4Q16654 411 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 TCTE1Q5JU00 501 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 CATSPEREQ5SY80 951 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 AGBL2Q5U5Z8 902 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 ATG9BQ674R7 924 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 ZYG11AQ6WRX3 759 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 SLCO4C1Q6ZQN7 724 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 ADCK2Q7Z695 626 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 PPP1R3BQ86XI6 285 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 SNX31Q8N9S9 440 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 OR1L3Q8NH93 324 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 GATA6Q92908 595 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 CCDC126Q96EE4 140 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 ZNF578Q96N58 590 aaPredicted RBP10.89□□□□□ -0.67
HSPG2-202ENST00000374676 OR2A5Q96R48 311 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 SPRY4Q9C004 299 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 PITHD1Q9GZP4 211 aaPredicted RBP10.89□□□□□ -0.67
HSPG2-202ENST00000374676 APMAPQ9HDC9 416 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 MID2Q9UJV3 735 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 ACSL6Q9UKU0 697 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 B3GALT1Q9Y5Z6 326 aa10.89□□□□□ -0.67
HSPG2-202ENST00000374676 A0A0J9YVX5 310 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 TRBC2A0A5B9 178 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 LRRC14BA6NHZ5 514 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 E2F3O00716 465 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 HAT1O14929 419 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 NRP2O60462 931 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 BRINP1O60477 761 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 H2AFYO75367 372 aaKnown RBP10.88□□□□□ -0.67
HSPG2-202ENST00000374676 SPAG7O75391 227 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 KATNA1O75449 491 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 WFS1O76024 890 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 SIX3O95343 332 aaPredicted RBP10.88□□□□□ -0.67
HSPG2-202ENST00000374676 RPS17P08708 135 aaKnown RBP10.88□□□□□ -0.67
HSPG2-202ENST00000374676 MYL2P10916 166 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 CPA3P15088 417 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 EPORP19235 508 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 IMPDH1P20839 514 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 CD82P27701 267 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 EEF1DP29692 281 aaKnown RBP10.88□□□□□ -0.67
HSPG2-202ENST00000374676 SLC5A2P31639 672 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 ITGA1P56199 1179 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 NAA20P61599 178 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 RPS15AP62244 130 aaKnown RBP10.88□□□□□ -0.67
HSPG2-202ENST00000374676 HERVK_113P63132 956 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms