RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 GADD45GO95257 159 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 SUPT20HL2P0C7V6 817 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ARSBP15848 533 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 HLA-FP30511 346 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 MAD2L1BPQ15013 274 aaPredicted RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 SUPT20HL1Q3ZLR7 823 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 IFI44LQ53G44 452 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 NIPA1Q7RTP0 329 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 GMCL1P1Q8NEA9 526 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ACER1Q8TDN7 264 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ZNF516Q92618 1163 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 LINGO1Q96FE5 620 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 MRPL48Q96GC5 212 aaKnown RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 TMEM80Q96HE8 168 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 SLX1AQ9BQ83 275 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 TKTL2Q9H0I9 626 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 SLC6A17Q9H1V8 727 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 C3orf14Q9HBI5 128 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 HOXC10Q9NYD6 342 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 GLYATL1P3A0A0U1RQE8 302 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 hCG_1807616A0A1W2PRN6 198 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ZNF705EA8MWA4 302 aaPredicted RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 F8W036 122 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 M0R036 132 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 SLC35E2BP0CK96 405 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 CD86P42081 329 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 MATKP42679 507 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ZNF132P52740 706 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 HK3P52790 923 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 VSX2P58304 361 aaPredicted RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 BLOC1S1P78537 153 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 IFITM2Q01629 132 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ABRQ12979 859 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ZNF169Q14929 603 aaPredicted RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 SF3A2Q15428 464 aaKnown RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 DCAF4L1Q3SXM0 396 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 KLHL26Q53HC5 615 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 STEAP4Q687X5 459 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ADNP2Q6IQ32 1131 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 SLC51AQ86UW1 340 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 NT5DC2Q9H857 520 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 GLOD4Q9HC38 313 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 KRCC1Q9NPI7 259 aaPredicted RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 STUB1Q9UNE7 303 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 LOC105371267A0A1B0GV96 52 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 TLR4O00206 839 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 E2F3O00716 465 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 IFNW1P05000 195 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ICAM1P05362 532 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 G6PDP11413 515 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 CBLP22681 906 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ITGA3P26006 1051 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 DGKEP52429 567 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 EMX2Q04743 252 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 HECTD3Q5T447 861 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 CEP97Q8IW35 865 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 PHACTR4Q8IZ21 702 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 PQLC3Q8N755 202 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 DENND6BQ8NEG7 585 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 APOLD1Q96LR9 279 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 PDCD2LQ9BRP1 358 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ACTR6Q9GZN1 396 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 DPEP3Q9H4B8 488 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 PRDM8Q9NQV8 689 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 PTGDR2Q9Y5Y4 395 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 MEGF6O75095 1541 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 A0A0X1KG70 313 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 LACTBL1A8MY62 500 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 EEDO75530 441 aaKnown RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 VNN1O95497 513 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 MT-CYBP00156 380 aaPredicted RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 GOT2P00505 430 aaKnown RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 SNHG28P0DPA3 235 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ITGB5P18084 799 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ABHD18Q0P651 414 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 VMACQ2NL98 169 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 NCEH1Q6PIU2 408 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 OR8J3Q8NGG0 315 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 DNAJB8Q8NHS0 232 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 FCRL3Q96P31 734 aaPredicted RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 SORBS1Q9BX66 1292 aaKnown RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 QRSL1Q9H0R6 528 aaKnown RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 IPPKQ9H8X2 491 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 RBFOX1Q9NWB1 397 aaKnown RBP9.97□□□□□ -0.81
CD28-202ENST00000374481 DNAJC27Q9NZQ0 273 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 ST3GAL5Q9UNP4 418 aa9.97□□□□□ -0.81
CD28-202ENST00000374481 SPEF2Q9C093 1822 aa9.96□□□□□ -0.81
CD28-202ENST00000374481 E9PI62 339 aa9.96□□□□□ -0.81
CD28-202ENST00000374481 CCL22O00626 93 aa9.96□□□□□ -0.81
CD28-202ENST00000374481 ALDH1A2O94788 518 aa9.96□□□□□ -0.81
CD28-202ENST00000374481 EGFRP00533 1210 aa9.96□□□□□ -0.81
CD28-202ENST00000374481 ALDOBP05062 364 aa9.96□□□□□ -0.81
CD28-202ENST00000374481 SRPRAP08240 638 aaKnown RBP9.96□□□□□ -0.81
CD28-202ENST00000374481 GGT1P19440 569 aa9.96□□□□□ -0.81
CD28-202ENST00000374481 BMPR1AP36894 532 aa9.96□□□□□ -0.81
CD28-202ENST00000374481 KEAP1Q14145 624 aa9.96□□□□□ -0.81
CD28-202ENST00000374481 TBCEQ15813 527 aaPredicted RBP9.96□□□□□ -0.81
CD28-202ENST00000374481 DPYSL2Q16555 572 aa9.96□□□□□ -0.81
CD28-202ENST00000374481 EFCAB12Q6NXP0 572 aa9.96□□□□□ -0.81
CD28-202ENST00000374481 WASH2PQ6VEQ5 465 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms