RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 PELI2Q9HAT8 420 aa15.11■□□□□ 0.01
NIPAL3-204ENST00000374399 BRF2Q9HAW0 419 aa15.11■□□□□ 0.01
NIPAL3-204ENST00000374399 TSC22D4Q9Y3Q8 395 aa15.11■□□□□ 0.01
NIPAL3-204ENST00000374399 CCDC163A0A0D9SF12 145 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 NRP2O60462 931 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 SLC22A3O75751 556 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 BCKDHAP12694 445 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 HSD3B1P14060 373 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 XRCC1P18887 633 aaPredicted RBP15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 TACR1P25103 407 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 HSD3B2P26439 372 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 NUDT2P50583 147 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 RPS13P62277 151 aaKnown RBP15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 PRDX1Q06830 199 aaKnown RBP15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 TBL3Q12788 808 aaKnown RBP15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 DDX39BQ13838 428 aaKnown RBP15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 VPS26BQ4G0F5 336 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 DNAL1Q4LDG9 190 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 C8orf82Q6P1X6 216 aaPredicted RBP15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 ADGRF3Q8IZF5 1079 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 KYQ8NBH2 561 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 FAM13CQ8NE31 585 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 SLC25A23Q9BV35 468 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 MAP10Q9P2G4 905 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 APOBEC3BQ9UH17 382 aaKnown RBP15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 BAIAP2L1Q9UHR4 511 aa15.1■□□□□ 0.01
NIPAL3-204ENST00000374399 H7BY64 318 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 FOXE1O00358 373 aaPredicted RBP15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 BTN3A3O00478 584 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 NR5A2O00482 541 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 PCNAP12004 261 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 NDUFS1P28331 727 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 PGM1P36871 562 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 NXPH1P58417 271 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 CSNK1G2P78368 415 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 RAE1P78406 368 aaKnown RBP15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 MXRA7P84157 204 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 REEP5Q00765 189 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 LAPTM5Q13571 262 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 RPS6KA2Q15349 733 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 MAPRE2Q15555 327 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 PRRT3Q5FWE3 981 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 PAGE2BQ5JRK9 111 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 PGM2L1Q6PCE3 622 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 RIPOR1Q6ZS17 1223 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 ARMCX6Q7L4S7 300 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 AMIGO1Q86WK6 493 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 DEFB107AQ8IZN7 70 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 LIX1Q8N485 282 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 RAB42Q8N4Z0 105 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 ANKRD53Q8N9V6 530 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 OR4E2Q8NGC2 313 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 SLC37A2Q8TED4 501 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 SH3KBP1Q96B97 665 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 CXorf40BQ96DE9 158 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 APOLD1Q96LR9 279 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 PRAP1Q96NZ9 151 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 THTPAQ9BU02 230 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 SLC6A20Q9NP91 592 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 DMRT3Q9NQL9 472 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 TMEM45AQ9NWC5 275 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 VPS29Q9UBQ0 182 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 ZDBF2Q9HCK1 2354 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 SORBS2O94875 1100 aaKnown RBP15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 CHRM5P08912 532 aaPredicted RBP15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 ACPPP15309 386 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 SDC1P18827 310 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 JAK1P23458 1154 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 BLKP51451 505 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 RAP1GDS1P52306 607 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 MAD2L1Q13257 205 aaPredicted RBP15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 GPR18Q14330 331 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 TLR1Q15399 786 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 SF1Q15637 639 aaKnown RBP15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 TMIGD1Q6UXZ0 262 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 LPCAT2Q7L5N7 544 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 TAF8Q7Z7C8 310 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 FBXL6Q8N531 539 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 KRTCAP2Q8N6L1 136 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 CHTF18Q8WVB6 975 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 LCN9Q8WX39 176 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 RAB3IPQ96QF0 476 aaPredicted RBP15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 RHBGQ9H310 441 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 MMADHCQ9H3L0 296 aaPredicted RBP15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 SYNPO2LQ9H987 977 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 EFCAB1Q9HAE3 211 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 OR6C2Q9NZP2 312 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 PRDM4Q9UKN5 801 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 EIF3LQ9Y262 564 aaKnown RBP15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 PCDHB11Q9Y5F2 797 aa15.09■□□□□ 0.01
NIPAL3-204ENST00000374399 FAM234BA2RU67 622 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 H0YHG0 523 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 LCMT2O60294 686 aaKnown RBP15.08■□□□□ 0
NIPAL3-204ENST00000374399 SH3BGRLO75368 114 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 KLHL18O94889 574 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 CTSEP14091 401 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 SHMT2P34897 504 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 CSNK1EP49674 416 aaKnown RBP15.08■□□□□ 0
NIPAL3-204ENST00000374399 CCR8P51685 355 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 POLR2JP52435 117 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms