RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ROR2Q01974 943 aaKnown RBP15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 GPM6BQ13491 265 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 DAG1Q14118 895 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 ATG9BQ674R7 924 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 FAM83HQ6ZRV2 1179 aaPredicted RBP15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 CALHM3Q86XJ0 350 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 ZDHHC13Q8IUH4 622 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 CSGALNACT1Q8TDX6 532 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 NELL1Q92832 810 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 ASB16Q96NS5 453 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 SPNS1Q9H2V7 528 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 EPB41L1Q9H4G0 881 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 DCAF13Q9NV06 445 aaKnown RBP15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 TMED5Q9Y3A6 229 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 CLIC1O00299 241 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 LILRB5O75023 590 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 ALPLP05186 524 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 EPHX1P07099 455 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 ANXA4P09525 319 aaPredicted RBP15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 NUDT7P0C024 238 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 HOXB9P17482 250 aaPredicted RBP15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 IL12RB1P42701 662 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 GRHL2Q6ISB3 625 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 FAM180BQ6P0A1 224 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 GPR149Q86SP6 731 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 ZNF740Q8NDX6 193 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 WFIKKN2Q8TEU8 576 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 ATL1Q8WXF7 558 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 TOR3AQ9H497 397 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 RAD18Q9NS91 495 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 TM7SF3Q9NS93 570 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 EXD2Q9NVH0 621 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 SPATA6Q9NWH7 488 aaPredicted RBP15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 NDUFA13Q9P0J0 144 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 SLC27A6Q9Y2P4 619 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 C2orf16Q68DN1 1984 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 FAM220BPB1ANY3 271 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 E2F6O75461 281 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 POP7O75817 140 aaKnown RBP15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 SCELO95171 688 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 TGFB1P01137 390 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 PRPS1L1P21108 318 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 ITGB7P26010 798 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 ALDH3A2P51648 485 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 UBE3AQ05086 875 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 C9orf50Q5SZB4 431 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 XKR5Q6UX68 686 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 TNIP2Q8NFZ5 429 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 OR56A3Q8NH54 315 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 SH3BP4Q9P0V3 963 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 NFKBIL1Q9UBC1 381 aaPredicted RBP15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 DMTF1Q9Y222 760 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 GABRR3A8MPY1 467 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 QSOX1O00391 747 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 AXIN1O15169 862 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 SCN2BO60939 215 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 CDH2P19022 906 aaPredicted RBP15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 AQP1P29972 269 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 SLC5A2P31639 672 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 PIGAP37287 484 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 ADARB1P78563 741 aaKnown RBP15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 CSTF3Q12996 717 aaKnown RBP15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 KCNC3Q14003 757 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 SLBPQ14493 270 aaKnown RBP eCLIP15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 DUOXA1Q1HG43 343 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 TANGO2Q6ICL3 276 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 ABRAXAS1Q6UWZ7 409 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 VTCN1Q7Z7D3 282 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 NLRP8Q86W28 1048 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 AADATQ8N5Z0 425 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 SGCDQ92629 289 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 BARD1Q99728 777 aaKnown RBP15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 OR51B5Q9H339 312 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 DYRK4Q9NR20 520 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 VNN3Q9NY84 501 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 PADI4Q9UM07 663 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 KCNE2Q9Y6J6 123 aa15.43■□□□□ 0.06
CNKSR1-202ENST00000374253 ALPK3Q96L96 1907 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 EDDM13A0A1B0GTR0 161 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 hCG_2039718K7EN88 272 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 NFATC1O95644 943 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 THRBP10828 461 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 NPPBP16860 134 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 POLR2IP36954 125 aaKnown RBP15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 LSAMPQ13449 338 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 ELAVL3Q14576 367 aaKnown RBP15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 ANGPTL8Q6UXH0 198 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 SLCO4C1Q6ZQN7 724 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 PATL1Q86TB9 770 aaKnown RBP15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 OR4K1Q8NGD4 311 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 MAL2Q969L2 176 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 PHF12Q96QT6 1004 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 AASDHPPTQ9NRN7 309 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 DNAJB9Q9UBS3 223 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 TDRKHQ9Y2W6 561 aaKnown RBP15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 TRPM6Q9BX84 2022 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 EVPLLA8MZ36 301 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 H0YIV9 168 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 HS6ST1O60243 411 aa15.42■□□□□ 0.06
CNKSR1-202ENST00000374253 PRSS23O95084 383 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms