RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 GRIK4Q16099 956 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 ATG9BQ674R7 924 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 GPR153Q6NV75 609 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 Q6ZPB1 254 aaPredicted RBP12.54□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF366Q8N895 744 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 ZBTB44Q8NCP5 570 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 STAG3L4Q8TBR4 150 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 BTN2A2Q8WVV5 523 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 OR5M11Q96RB7 305 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 SCPEP1Q9HB40 452 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 MAN2B2Q9Y2E5 1009 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 SAMHD1Q9Y3Z3 626 aaKnown RBP12.54□□□□□ -0.4
PRPF4-201ENST00000374198 A0A0G2JMZ2 1700 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 LRRC37A2A6NM11 1700 aa12.54□□□□□ -0.4
PRPF4-201ENST00000374198 STX16O14662 325 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 PER2O15055 1255 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 PI15O43692 258 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF682O95780 498 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 GPC1P35052 558 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 NRG1Q02297 640 aaPredicted RBP12.53□□□□□ -0.4
PRPF4-201ENST00000374198 RUNX1T1Q06455 604 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF33AQ06730 810 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 EIF4HQ15056 248 aaKnown RBP12.53□□□□□ -0.4
PRPF4-201ENST00000374198 POU4F3Q15319 338 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 FAM160B1Q5W0V3 765 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 TMEM81Q6P7N7 255 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 GPAT4Q86UL3 456 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 CALHM3Q86XJ0 350 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 LURAP1LQ8IV03 231 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 PHC2Q8IXK0 858 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 FBXW5Q969U6 566 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 GALPQ9UBC7 116 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 FBXW11Q9UKB1 542 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 POLR3HQ9Y535 204 aaPredicted RBP12.53□□□□□ -0.4
PRPF4-201ENST00000374198 SNX10Q9Y5X0 201 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 NUP205Q92621 2012 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 CCL22O00626 93 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 PROM1O43490 865 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF623O75123 536 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 PPM1BO75688 479 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 OR4F21O95013 312 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 AGTR2P50052 363 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 GZMMP51124 257 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 RAB25P57735 213 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 UBE3AQ05086 875 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.53□□□□□ -0.4
PRPF4-201ENST00000374198 MED22Q15528 200 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 AMHR2Q16671 573 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 GTDC1Q4AE62 458 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 INO80DQ53TQ3 878 aaPredicted RBP12.53□□□□□ -0.4
PRPF4-201ENST00000374198 GPRIN3Q6ZVF9 776 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 GLCCI1Q86VQ1 547 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 C10orf111Q8N326 155 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 OR7D4Q8NG98 312 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 GPR152Q8TDT2 470 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 KIAA1191Q96A73 305 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 FAM120BQ96EK7 910 aaKnown RBP12.53□□□□□ -0.4
PRPF4-201ENST00000374198 KCNC2Q96PR1 638 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 SLC2A13Q96QE2 648 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 GABARAPL3Q9BY60 117 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 TAS2R16Q9NYV7 291 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 IL20Q9NYY1 176 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 PCTPQ9UKL6 214 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 SCML1Q9UN30 329 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 SAMD4AQ9UPU9 718 aaKnown RBP12.53□□□□□ -0.4
PRPF4-201ENST00000374198 MAPRE3Q9UPY8 281 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
PRPF4-201ENST00000374198 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 IGKV6-21A0A0C4DH24 114 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 PRR23AA6NEV1 266 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 FABP12A6NFH5 140 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 OR51F1A6NGY5 319 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 H3BM21 787 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 PPEF2O14830 753 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 ECI2O75521 394 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 CCNCP24863 283 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 EVI2BP34910 448 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 GGT2P36268 569 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 MAP2K3P46734 347 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 SUOXP51687 545 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 SSX1Q16384 188 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 FAM174BQ3ZCQ3 159 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 LRRC66Q68CR7 880 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 OR4F3Q6IEY1 312 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 C17orf99Q6UX52 265 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 HFE2Q6ZVN8 426 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 LINC00469Q8N7U9 141 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 DCBLD1Q8N8Z6 715 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 OR56A4Q8NGH8 313 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 GIMAP5Q96F15 307 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 KIF12Q96FN5 646 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 ZBTB18Q99592 522 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 MFSD1Q9H3U5 465 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 EXOSC4Q9NPD3 245 aaKnown RBP12.52□□□□□ -0.4
PRPF4-201ENST00000374198 RAD18Q9NS91 495 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 SNTG1Q9NSN8 517 aa12.52□□□□□ -0.4
PRPF4-201ENST00000374198 IQCMA0A1B0GVH7 501 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 GFRA2O00451 464 aa12.52□□□□□ -0.41
PRPF4-201ENST00000374198 SCAMP3O14828 347 aaKnown RBP12.52□□□□□ -0.41
PRPF4-201ENST00000374198 ICAM3P32942 547 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms