RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 CCR8P51685 355 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 ZNF844Q08AG5 666 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 SETDB1Q15047 1291 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 FBXO48Q5FWF7 155 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 TCTE1Q5JU00 501 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 CEP85LQ5SZL2 805 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 PWWP2BQ6NUJ5 590 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 TLDC1Q6P9B6 456 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 LRIG3Q6UXM1 1119 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 SNX31Q8N9S9 440 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 ZNF248Q8NDW4 579 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 ABHD11Q8NFV4 315 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 SNIP1Q8TAD8 396 aaKnown RBP17.56■□□□□ 0.4
PBX3-202ENST00000373482 NEIL2Q969S2 332 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 RERGQ96A58 199 aaPredicted RBP17.56■□□□□ 0.4
PBX3-202ENST00000373482 ESAMQ96AP7 390 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 RUFY1Q96T51 708 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 PELI2Q9HAT8 420 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 TMEM216Q9P0N5 145 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 PILRAQ9UKJ1 303 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 GRID1Q9ULK0 1009 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 TMEM184BQ9Y519 407 aaPredicted RBP17.56■□□□□ 0.4
PBX3-202ENST00000373482 PCDHB3Q9Y5E6 796 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 TNPO3Q9Y5L0 923 aaKnown RBP17.56■□□□□ 0.4
PBX3-202ENST00000373482 AP1M2Q9Y6Q5 423 aa17.56■□□□□ 0.4
PBX3-202ENST00000373482 URB1O60287 2271 aaKnown RBP17.56■□□□□ 0.4
PBX3-202ENST00000373482 RGS16O15492 202 aaPredicted RBP17.55■□□□□ 0.4
PBX3-202ENST00000373482 HCRTR1O43613 425 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 KLK8O60259 260 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 CPNE3O75131 537 aaKnown RBP17.55■□□□□ 0.4
PBX3-202ENST00000373482 CAPNS1P04632 268 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 HBQ1P09105 142 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 LIPCP11150 499 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 VSX2P58304 361 aaPredicted RBP17.55■□□□□ 0.4
PBX3-202ENST00000373482 RPS15AP62244 130 aaKnown RBP17.55■□□□□ 0.4
PBX3-202ENST00000373482 CSNK1G2P78368 415 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 PDK4Q16654 411 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 FBXO42Q6P3S6 717 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 TMPRSS11BQ86T26 416 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 TRABD2AQ86V40 505 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 ZFAND4Q86XD8 727 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 SRRM1Q8IYB3 904 aaKnown RBP17.55■□□□□ 0.4
PBX3-202ENST00000373482 C4orf33Q8N1A6 199 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 CLIP3Q96DZ5 547 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 IQCGQ9H095 443 aaKnown RBP17.55■□□□□ 0.4
PBX3-202ENST00000373482 ANGPTL3Q9Y5C1 460 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 AHCTF1Q8WYP5 2266 aa17.55■□□□□ 0.4
PBX3-202ENST00000373482 SCN2AQ99250 2005 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.54■□□□□ 0.4
PBX3-202ENST00000373482 K7EPI3 171 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 ZSCAN9O15535 394 aaPredicted RBP17.54■□□□□ 0.4
PBX3-202ENST00000373482 TLX3O43711 291 aaPredicted RBP17.54■□□□□ 0.4
PBX3-202ENST00000373482 NRP2O60462 931 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 H2AFYO75367 372 aaKnown RBP17.54■□□□□ 0.4
PBX3-202ENST00000373482 TIAF1O95411 115 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 CXCR2P25025 360 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 CRHR1P34998 444 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 AGTR2P50052 363 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 PCBP2Q15366 365 aaKnown RBP eCLIP17.54■□□□□ 0.4
PBX3-202ENST00000373482 CCDC153Q494R4 210 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 CATSPEREQ5SY80 951 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 METTL2BQ6P1Q9 378 aaKnown RBP17.54■□□□□ 0.4
PBX3-202ENST00000373482 C16orf46Q6P387 395 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 SH2D5Q6ZV89 423 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 PROSER1Q86XN7 944 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 NLGN4XQ8N0W4 816 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 ZNF655Q8N720 491 aaPredicted RBP17.54■□□□□ 0.4
PBX3-202ENST00000373482 PTGR2Q8N8N7 351 aaPredicted RBP17.54■□□□□ 0.4
PBX3-202ENST00000373482 TTC29Q8NA56 475 aaPredicted RBP17.54■□□□□ 0.4
PBX3-202ENST00000373482 NLGN4YQ8NFZ3 816 aaPredicted RBP17.54■□□□□ 0.4
PBX3-202ENST00000373482 OR4K1Q8NGD4 311 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 KCNE4Q8WWG9 221 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 PHF21BQ96EK2 531 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 THAP11Q96EK4 314 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 SMC6Q96SB8 1091 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 AIF1LQ9BQI0 150 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 SPRTNQ9H040 489 aaPredicted RBP17.54■□□□□ 0.4
PBX3-202ENST00000373482 CENPHQ9H3R5 247 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 ACTR5Q9H9F9 607 aaPredicted RBP17.54■□□□□ 0.4
PBX3-202ENST00000373482 SENP1Q9P0U3 644 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 SRPK3Q9UPE1 567 aa17.54■□□□□ 0.4
PBX3-202ENST00000373482 FEZF1A0PJY2 475 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 STX16-NPEPL1H3BU86 382 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 TXNDC9O14530 226 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 STX16O14662 325 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 RRP8O43159 456 aaKnown RBP17.53■□□□□ 0.4
PBX3-202ENST00000373482 ZNF749O43361 778 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 DLGAP3O95886 979 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 NTRK1P04629 796 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 EIF2S1P05198 315 aaKnown RBP17.53■□□□□ 0.4
PBX3-202ENST00000373482 CCNYL3P0C7X3 344 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 MYZAPP0CAP1 466 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 C1GALT1C1LP0DN25 315 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 EPB42P16452 691 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 ZNF28P17035 718 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 PIK3CGP48736 1102 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 ATP1A2P50993 1020 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 ARSFP54793 590 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 SLC18A2Q05940 514 aa17.53■□□□□ 0.4
PBX3-202ENST00000373482 MAP7Q14244 749 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms