RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 ABHD11Q8NFV4 315 aa17.38■□□□□ 0.37
CD40-202ENST00000372285 GPBAR1Q8TDU6 330 aa17.38■□□□□ 0.37
CD40-202ENST00000372285 SNX19Q92543 992 aa17.38■□□□□ 0.37
CD40-202ENST00000372285 VPS33AQ96AX1 596 aa17.38■□□□□ 0.37
CD40-202ENST00000372285 C11orf24Q96F05 449 aaPredicted RBP17.38■□□□□ 0.37
CD40-202ENST00000372285 ZBTB18Q99592 522 aa17.38■□□□□ 0.37
CD40-202ENST00000372285 HOPXQ9BPY8 73 aaPredicted RBP17.38■□□□□ 0.37
CD40-202ENST00000372285 GPATCH1Q9BRR8 931 aaKnown RBP17.38■□□□□ 0.37
CD40-202ENST00000372285 ACAT2Q9BWD1 397 aa17.38■□□□□ 0.37
CD40-202ENST00000372285 DPY30Q9C005 99 aa17.38■□□□□ 0.37
CD40-202ENST00000372285 SPNS1Q9H2V7 528 aa17.38■□□□□ 0.37
CD40-202ENST00000372285 GID8Q9NWU2 228 aa17.38■□□□□ 0.37
CD40-202ENST00000372285 SDC1P18827 310 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 CD27P26842 260 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 HNRNPH1P31943 449 aaKnown RBP17.37■□□□□ 0.37
CD40-202ENST00000372285 PIK3CBP42338 1070 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 ILF3Q12906 894 aaKnown RBP eCLIP17.37■□□□□ 0.37
CD40-202ENST00000372285 CEACAM7Q14002 265 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 ZNF423Q2M1K9 1284 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 TIGD2Q4W5G0 525 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 C1orf146Q5VVC0 180 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 NOXRED1Q6NXP6 359 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 SLC30A9Q6PML9 568 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 PACS2Q86VP3 889 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 DCP2Q8IU60 420 aaKnown RBP17.37■□□□□ 0.37
CD40-202ENST00000372285 KRT78Q8N1N4 520 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 MINDY1Q8N5J2 469 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 OR4K1Q8NGD4 311 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 KLHDC7BQ96G42 594 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 APOLD1Q96LR9 279 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 PITHD1Q9GZP4 211 aaPredicted RBP17.37■□□□□ 0.37
CD40-202ENST00000372285 CLMPQ9H6B4 373 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 XKR8Q9H6D3 395 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 ZNF624Q9P2J8 865 aaPredicted RBP17.37■□□□□ 0.37
CD40-202ENST00000372285 THEGQ9P2T0 379 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 PPT2Q9UMR5 302 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 POMPQ9Y244 141 aa17.37■□□□□ 0.37
CD40-202ENST00000372285 RUVBL1Q9Y265 456 aaKnown RBP17.37■□□□□ 0.37
CD40-202ENST00000372285 PRICKLE3O43900 615 aaPredicted RBP17.36■□□□□ 0.37
CD40-202ENST00000372285 SORBS2O94875 1100 aaKnown RBP17.36■□□□□ 0.37
CD40-202ENST00000372285 ETHE1O95571 254 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 F3P13726 295 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 CXCR2P25025 360 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 PSMB5P28074 263 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 RPS13P62277 151 aaKnown RBP17.36■□□□□ 0.37
CD40-202ENST00000372285 YBX1P67809 324 aaKnown RBP17.36■□□□□ 0.37
CD40-202ENST00000372285 MEF2AQ02078 507 aaPredicted RBP17.36■□□□□ 0.37
CD40-202ENST00000372285 FOXM1Q08050 763 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 ICE2Q659A1 982 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 PRMT9Q6P2P2 845 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 LAYNQ6UX15 382 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 TMIGD1Q6UXZ0 262 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 DPP10Q8N608 796 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 CHTF18Q8WVB6 975 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 SLC6A18Q96N87 628 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 NT5DC2Q9H857 520 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 SPAG4Q9NPE6 437 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 DMRT3Q9NQL9 472 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 NMRK1Q9NWW6 199 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 TMEM181Q9P2C4 612 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 SIT1Q9Y3P8 196 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 SLCO1B1Q9Y6L6 691 aa17.36■□□□□ 0.37
CD40-202ENST00000372285 SNRNP200O75643 2136 aaKnown RBP17.36■□□□□ 0.37
CD40-202ENST00000372285 PRAMEF33A0A0G2JMD5 474 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 FXYD1O00168 92 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 NPPAP01160 153 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 LMNAP02545 664 aaKnown RBP17.35■□□□□ 0.37
CD40-202ENST00000372285 CCR8P51685 355 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 ACSM2AQ08AH3 577 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 PAGE3Q5JUK9 113 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 ACSM2BQ68CK6 577 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 ZNF740Q8NDX6 193 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 OR2A1Q8NGT9 310 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 AIF1LQ9BQI0 150 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 IER2Q9BTL4 223 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 RHBGQ9H310 441 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 CUEDC1Q9NWM3 386 aaPredicted RBP17.35■□□□□ 0.37
CD40-202ENST00000372285 SIRT5Q9NXA8 310 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 ADA2Q9NZK5 511 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 ADGRE2Q9UHX3 823 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 PCDHB11Q9Y5F2 797 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 CROCCQ5TZA2 2017 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 TDRD6O60522 2096 aaKnown RBP17.35■□□□□ 0.37
CD40-202ENST00000372285 TRIM38O00635 465 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 IL6P05231 212 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 ME2P23368 584 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 TACR1P25103 407 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 SHMT2P34897 504 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 SLC19A1P41440 591 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 CXCL12P48061 93 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 CLNS1AP54105 237 aaKnown RBP17.35■□□□□ 0.37
CD40-202ENST00000372285 PHEXP78562 749 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 REEP5Q00765 189 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 PRDX1Q06830 199 aaKnown RBP17.35■□□□□ 0.37
CD40-202ENST00000372285 TCEA2Q15560 299 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 SPIN4Q56A73 249 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 PHACTR4Q8IZ21 702 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 MFSD2AQ8NA29 543 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 LRRC58Q96CX6 371 aa17.35■□□□□ 0.37
CD40-202ENST00000372285 CXorf40BQ96DE9 158 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms