RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ARL4AP40617 200 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 MTHFRP42898 656 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 NDUFV1P49821 464 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 GDI2P50395 445 aaKnown RBP8.6□□□□□ -1.03
ATG4A-203ENST00000372232 AIF1P55008 147 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 HSD17B7P56937 341 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 STX5Q13190 355 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 SF1Q15637 639 aaKnown RBP8.6□□□□□ -1.03
ATG4A-203ENST00000372232 TPSAB1Q15661 275 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 RTP2Q5QGT7 225 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 HEATR6Q6AI08 1181 aaKnown RBP8.6□□□□□ -1.03
ATG4A-203ENST00000372232 FAM45BPQ6NSW5 357 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 CES5AQ6NT32 575 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 C17orf99Q6UX52 265 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 HACD2Q6Y1H2 254 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 CLEC20AQ6ZU45 233 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 ZNF534Q76KX8 674 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 NAT16Q8N8M0 369 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 FAM45AQ8TCE6 357 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 GPBAR1Q8TDU6 330 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 ARL5BQ96KC2 179 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 FTHL17Q9BXU8 183 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 RACGAP1Q9H0H5 632 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 SMOC2Q9H3U7 446 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 FAM83DQ9H4H8 585 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 POLE3Q9NRF9 147 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 CHRAC1Q9NRG0 131 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 TRMT13Q9NUP7 481 aaKnown RBP8.6□□□□□ -1.03
ATG4A-203ENST00000372232 INTS6Q9UL03 887 aaKnown RBP8.6□□□□□ -1.03
ATG4A-203ENST00000372232 SPATA2Q9UM82 520 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 KLHL20Q9Y2M5 609 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 PEX16Q9Y5Y5 336 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 RAB19A4D1S5 217 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 MYADML2A6NDP7 307 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 EFCAB9A8MZ26 197 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 EPOP01588 193 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 CYP11A1P05108 521 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 GPIP06744 558 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 FABP1P07148 127 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 SLC2A4P14672 509 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 ITGB6P18564 788 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 AKR1D1P51857 326 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 PITX1P78337 314 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-203ENST00000372232 MRPS6P82932 125 aaKnown RBP8.6□□□□□ -1.03
ATG4A-203ENST00000372232 SEMA5AQ13591 1074 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 KIF19Q2TAC6 998 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 FUT11Q495W5 492 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 SEL1L3Q68CR1 1132 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 REP15Q6BDI9 236 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 LAIR2Q6ISS4 152 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 LCN8Q6JVE9 175 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 TIGD4Q8IY51 512 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 OR8H3Q8N146 312 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 MPP5Q8N3R9 675 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 C9orf62Q8N4C0 152 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 CLRN3Q8NCR9 226 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 PAPD5Q8NDF8 572 aaKnown RBP8.6□□□□□ -1.03
ATG4A-203ENST00000372232 HTR3CQ8WXA8 447 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 ASB12Q8WXK4 309 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 ZNF566Q969W8 418 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 AP2M1Q96CW1 435 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 REPS1Q96D71 796 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 C11orf24Q96F05 449 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-203ENST00000372232 SENP8Q96LD8 212 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 SLC2A13Q96QE2 648 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 NPY6RQ99463 290 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 SLC30A3Q99726 388 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 NPAS1Q99742 590 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 NUSAP1Q9BXS6 441 aaKnown RBP8.6□□□□□ -1.03
ATG4A-203ENST00000372232 CRISPLD1Q9H336 500 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 TRIM45Q9H8W5 580 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-203ENST00000372232 ST3GAL5Q9UNP4 418 aa8.6□□□□□ -1.03
ATG4A-203ENST00000372232 ZFR2Q9UPR6 939 aaKnown RBP8.6□□□□□ -1.03
ATG4A-203ENST00000372232 A0A0A6YYJ9 748 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 PMS2P1A4D2B8 440 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 MANSC4A6NHS7 340 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-203ENST00000372232 SLC1A7O00341 560 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 HS6ST1O60243 411 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 TPST1O60507 370 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 H2AFYO75367 372 aaKnown RBP8.59□□□□□ -1.03
ATG4A-203ENST00000372232 NPPAP01160 153 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 AKR1A1P14550 325 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 AFF1P51825 1210 aaKnown RBP8.59□□□□□ -1.03
ATG4A-203ENST00000372232 DSC1Q08554 894 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 ANGPT1Q15389 498 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 DUSP6Q16828 381 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 CTU2Q2VPK5 515 aaKnown RBP8.59□□□□□ -1.03
ATG4A-203ENST00000372232 SYPL2Q5VXT5 272 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 TTC23Q5W5X9 447 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 TMEM198Q66K66 360 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 KDM4DQ6B0I6 523 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 OR7E24Q6IFN5 339 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 FAM180BQ6P0A1 224 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 NAPRTQ6XQN6 538 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 MACC1Q6ZN28 852 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 CCDC190Q86UF4 302 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 STX12Q86Y82 276 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 RASAL3Q86YV0 1011 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 RDH10Q8IZV5 341 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 LINC00528Q8N1L1 170 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms