RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 KRT8P05787 483 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 MMP2P08253 660 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 C1GALT1C1LP0DN25 315 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 MTHFD1P11586 935 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CEBPBP17676 345 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ENGP17813 658 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 HRH2P25021 359 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ACTR1BP42025 376 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CTSOP43234 321 aaPredicted RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 DEFA1P59665 94 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 DEFA3P59666 94 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ERVPABLB-1P60509 514 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ACTR1AP61163 376 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNF763Q0D2J5 394 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 LSAMPQ13449 338 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CEACAM7Q14002 265 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 NDUFA9Q16795 377 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 HKDC1Q2TB90 917 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ZC3H12BQ5HYM0 836 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 DGKKQ5KSL6 1271 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 C1orf53Q5VUE5 145 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 HLA-DQA1Q5Y7H0 255 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 OR4F3Q6IEY1 312 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 NOXRED1Q6NXP6 359 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SH2D5Q6ZV89 423 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 LARP4Q71RC2 724 aaKnown RBP eCLIP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 TAF8Q7Z7C8 310 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 HEATR4Q86WZ0 1026 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 BPIFB6Q8NFQ5 453 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ADAMTS15Q8TE58 950 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 GATA6Q92908 595 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 EXOSC8Q96B26 276 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 TCEAL4Q96EI5 215 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 METTL2AQ96IZ6 378 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 VPS35Q96QK1 796 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PKP2Q99959 881 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 BTBD1Q9H0C5 482 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 RHBGQ9H310 441 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 EVA1BQ9NVM1 165 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SOHLH2Q9NX45 425 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 DNMT3BQ9UBC3 853 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PDE10AQ9Y233 779 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 MAP4K5Q9Y4K4 846 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PCDHB11Q9Y5F2 797 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 HCFC2Q9Y5Z7 792 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 WDR90Q96KV7 1748 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 H0YJX3 145 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 TGFB1P01137 390 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 C7P10643 843 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 BCKDHAP12694 445 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 MYL12AP19105 171 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CR2P20023 1033 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ARNTP27540 789 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 AQP1P29972 269 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CLCN2P51788 898 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 CLDN8P56748 225 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ERVFC1P60507 584 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 DAG1Q14118 895 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 LRRC32Q14392 662 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 NR1D2Q14995 579 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ABRAXAS2Q15018 415 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNF423Q2M1K9 1284 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 RGS21Q2M5E4 152 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 RABL3Q5HYI8 236 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 ENPP7Q6UWV6 458 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 NPAS3Q8IXF0 933 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC15A3Q8IY34 581 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SPPL3Q8TCT6 385 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 BCL7CQ8WUZ0 217 aaPredicted RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 KLK6Q92876 244 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 FAM83CQ9BQN1 747 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 NTMT1Q9BV86 223 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 NEUROD4Q9HD90 331 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PDP1Q9P0J1 537 aaPredicted RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 TAC3Q9UHF0 121 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 SCML1Q9UN30 329 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 WBP11Q9Y2W2 641 aaKnown RBP5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 PCDHB3Q9Y5E6 796 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 U3KQV3 271 aa5.16□□□□□ -1.58
SMNDC1-202ENST00000369603 TRIP12Q14669 1992 aaPredicted RBP5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 HNRNPCL2B2RXH8 293 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 H3BSA7 217 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 TNFRSF11BO00300 401 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 BCKDKO14874 412 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 H6PDO95479 791 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 PDYNP01213 254 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 CDH3P22223 829 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 KCNA5P22460 613 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 SGSHP51688 502 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 CSNK2BP67870 215 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 PRKCQQ04759 706 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 MERTKQ12866 999 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 CCNIQ14094 377 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 MYBPC3Q14896 1274 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 KIAA1161Q6NSJ0 714 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNF540Q8NDQ6 660 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 XAGE5Q8WWM1 108 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 BORCS5Q969J3 196 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 BIRC7Q96CA5 298 aa5.15□□□□□ -1.58
SMNDC1-202ENST00000369603 ABHD8Q96I13 439 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms