RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 USE1Q9NZ43 259 aa12.74□□□□□ -0.37
ECM1-202ENST00000369047 RSL24D1Q9UHA3 163 aaKnown RBP12.74□□□□□ -0.37
ECM1-202ENST00000369047 KCNE2Q9Y6J6 123 aa12.74□□□□□ -0.37
ECM1-202ENST00000369047 EDDM13A0A1B0GTR0 161 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 TMEM202A6NGA9 273 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 H3BM21 787 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 H3BSA7 217 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 ZNF701M0R085 212 aaPredicted RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 KPNA3O00505 521 aaPredicted RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 GNGT2O14610 69 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 PRKD3O94806 890 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 THRBP10828 461 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 ETS2P15036 469 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 NELFEP18615 380 aaKnown RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 CDK9P50750 372 aaKnown RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 BIRC2Q13490 618 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 TJAP1Q5JTD0 557 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 OTUD3Q5T2D3 398 aaPredicted RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 ZNF648Q5T619 568 aaPredicted RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 TMEM214Q6NUQ4 689 aaKnown RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 DNAJC14Q6Y2X3 702 aaPredicted RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 STK32CQ86UX6 486 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.73□□□□□ -0.37
ECM1-202ENST00000369047 ING5Q8WYH8 240 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 OR8D1Q8WZ84 308 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 NCLNQ969V3 563 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 TBC1D20Q96BZ9 403 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 C11orf24Q96F05 449 aaPredicted RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 PYURFQ96I23 114 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 PKP4Q99569 1192 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 RBM4BQ9BQ04 359 aaKnown RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 INPP5KQ9BT40 448 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 RBM4Q9BWF3 364 aaKnown RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 OSBPL10Q9BXB5 764 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 MTG2Q9H4K7 406 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 SLC6A13Q9NSD5 602 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 SAMD4AQ9UPU9 718 aaKnown RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 NUP210Q8TEM1 1887 aaPredicted RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 TRANK1O15050 2925 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 A0A1B0GTW7 788 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 C17orf113A0A1B0GUU1 675 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 NPC1O15118 1278 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 NFATC1O95644 943 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 PCNAP12004 261 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 CD22P20273 847 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 IMPA1P29218 277 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 TFF2Q03403 129 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 DPTQ07507 201 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 EIF4HQ15056 248 aaKnown RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 ZBED5Q49AG3 693 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 GTDC1Q4AE62 458 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 ZNF658BQ4V348 819 aaPredicted RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 TMEM259Q4ZIN3 620 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 SPIN4Q56A73 249 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 OR4F3Q6IEY1 312 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 ETFBKMTQ8IXQ9 262 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 PHACTR4Q8IZ21 702 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 ZCCHC7Q8N3Z6 543 aaKnown RBP12.73□□□□□ -0.37
ECM1-202ENST00000369047 VPS37AQ8NEZ2 397 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 OR5K1Q8NHB7 308 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 NETO1Q8TDF5 533 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 MED8Q96G25 268 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 PPP1R16AQ96I34 528 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 FBXL20Q96IG2 436 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 EGLN2Q96KS0 407 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 LRRC3BQ96PB8 259 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 SPATA9Q9BWV2 254 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 SGK2Q9HBY8 427 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 HPS4Q9NQG7 708 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 GDE1Q9NZC3 331 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 GMEB1Q9Y692 573 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 C2orf16Q68DN1 1984 aa12.73□□□□□ -0.37
ECM1-202ENST00000369047 E7EQ34 232 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 FPGTO14772 594 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 SEC24DO94855 1032 aaPredicted RBP12.72□□□□□ -0.37
ECM1-202ENST00000369047 SLC16A8O95907 504 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 GPX2P18283 190 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 HNRNPA1L2Q32P51 320 aaKnown RBP12.72□□□□□ -0.37
ECM1-202ENST00000369047 CAPN13Q6MZZ7 669 aaPredicted RBP12.72□□□□□ -0.37
ECM1-202ENST00000369047 GET4Q7L5D6 327 aaPredicted RBP12.72□□□□□ -0.37
ECM1-202ENST00000369047 GPR141Q7Z602 305 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 FAM86B1Q8N7N1 296 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 MPP4Q96JB8 637 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 LINC00615Q96LM1 132 aaPredicted RBP12.72□□□□□ -0.37
ECM1-202ENST00000369047 OR4K3Q96R72 315 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 PANX1Q96RD7 426 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 REXO4Q9GZR2 422 aaKnown RBP12.72□□□□□ -0.37
ECM1-202ENST00000369047 AASDHPPTQ9NRN7 309 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 SIRT5Q9NXA8 310 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 DEC1Q9P2X7 70 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 CDH7Q9ULB5 785 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 GPR34Q9UPC5 381 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 AP1M2Q9Y6Q5 423 aa12.72□□□□□ -0.37
ECM1-202ENST00000369047 CLIC1O00299 241 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 SCN2BO60939 215 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 EPN2O95208 641 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 LRATO95237 230 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 SLC34A2O95436 690 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 C1orf105O95561 183 aa12.71□□□□□ -0.37
ECM1-202ENST00000369047 SERPINA1P01009 418 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms