RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 KIR2DL1P43626 348 aaPredicted RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 PSMD8P48556 350 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 SIM1P81133 766 aaPredicted RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 CREB5Q02930 508 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 PRKAA1Q13131 559 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 SPIDRQ14159 915 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 CYP27C1Q4G0S4 372 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 GPRC6AQ5T6X5 926 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 NAPRTQ6XQN6 538 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 ADAMTSL2Q86TH1 951 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 MMAAQ8IVH4 418 aaKnown RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 CPNE9Q8IYJ1 553 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 STON2Q8WXE9 905 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 SGF29Q96ES7 293 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 COQ10AQ96MF6 247 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 JMJD8Q96S16 334 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 UNKQ9C0B0 810 aaKnown RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 ILKAPQ9H0C8 392 aaPredicted RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 RSPH9Q9H1X1 276 aaPredicted RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 KCNK13Q9HB14 408 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 SARS2Q9NP81 518 aaKnown RBP8.53□□□□□ -1.04
TPM3-213ENST00000368545 HEBP1Q9NRV9 189 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 CD84Q9UIB8 345 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 CFAP54Q96N23 3096 aa8.53□□□□□ -1.04
TPM3-213ENST00000368545 J3KRW8 73 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 BTN3A1O00481 513 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 SLC25A14O95258 325 aaPredicted RBP8.52□□□□□ -1.05
TPM3-213ENST00000368545 KITP10721 976 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 CDK4P11802 303 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 ENO3P13929 434 aaPredicted RBP8.52□□□□□ -1.05
TPM3-213ENST00000368545 MSH3P20585 1137 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 IMPDH1P20839 514 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 DRD1P21728 446 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 NTSR1P30989 418 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 CA5AP35218 305 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 P2RY2P41231 377 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 HERVK_113P63132 956 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 EGR3Q06889 387 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 STARD3Q14849 445 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 OR4D1Q15615 310 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 CST6Q15828 149 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 ADRM1Q16186 407 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 LACTB2Q53H82 288 aaPredicted RBP8.52□□□□□ -1.05
TPM3-213ENST00000368545 CCDC157Q569K6 752 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 EMC4Q5J8M3 183 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 PRAMEF9Q5VWM5 478 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 ZNF776Q68DI1 518 aaPredicted RBP8.52□□□□□ -1.05
TPM3-213ENST00000368545 RFLNAQ6ZTI6 216 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 ZBTB2Q8N680 514 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 CXorf40AQ8TE69 158 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 EEF1AKMT1Q8WVE0 214 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 AP2M1Q96CW1 435 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 NUS1Q96E22 293 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 TMEM237Q96Q45 408 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 ACOX2Q99424 681 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 GABRG3Q99928 467 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 WRAP53Q9BUR4 548 aaKnown RBP8.52□□□□□ -1.05
TPM3-213ENST00000368545 ERVK-6Q9BXR3 956 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 ACTR5Q9H9F9 607 aaPredicted RBP8.52□□□□□ -1.05
TPM3-213ENST00000368545 ABCF3Q9NUQ8 709 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 MARCOQ9UEW3 520 aaPredicted RBP8.52□□□□□ -1.05
TPM3-213ENST00000368545 ITM2BQ9Y287 266 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 PRSS21Q9Y6M0 314 aa8.52□□□□□ -1.05
TPM3-213ENST00000368545 NPEPPSL1A6NEC2 478 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 IQCF5A8MTL0 148 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 SUPT3HB4E1H0 165 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 STX16-NPEPL1H3BU86 382 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 STX16O14662 325 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 SUPT3HO75486 399 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 FTH1P02794 183 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 C6P13671 934 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 GFAPP14136 432 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 ARRB2P32121 409 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 METAP1P53582 386 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 AQP5P55064 265 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 UCNP55089 124 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 B4GALNT1Q00973 533 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 DPTQ07507 201 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 GRSF1Q12849 480 aaKnown RBP eCLIP8.51□□□□□ -1.05
TPM3-213ENST00000368545 BLMHQ13867 455 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 TSNQ15631 228 aaKnown RBP8.51□□□□□ -1.05
TPM3-213ENST00000368545 ARL13AQ5H913 290 aaPredicted RBP8.51□□□□□ -1.05
TPM3-213ENST00000368545 TMEM196Q5HYL7 178 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 ZNF678Q5SXM1 525 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 FRA10AC1Q70Z53 315 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 FBXO39Q8N4B4 442 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 CLDN19Q8N6F1 224 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 CCNYL1Q8N7R7 359 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 OR2T3Q8NH03 318 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 SCAMP4Q969E2 229 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 GLYATL1Q969I3 302 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 FUBP1Q96AE4 644 aaKnown RBP8.51□□□□□ -1.05
TPM3-213ENST00000368545 RGMAQ96B86 450 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 ERP27Q96DN0 273 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 PHF21BQ96EK2 531 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 RIOK2Q9BVS4 552 aaKnown RBP8.51□□□□□ -1.05
TPM3-213ENST00000368545 ABCG8Q9H221 673 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 FBRSL1Q9HCM7 1045 aaKnown RBP8.51□□□□□ -1.05
TPM3-213ENST00000368545 SEMA3GQ9NS98 782 aa8.51□□□□□ -1.05
TPM3-213ENST00000368545 GALPQ9UBC7 116 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms