RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 FAM86B1Q8N7N1 296 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 MTMR14Q8NCE2 650 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 EURLQ9NYK6 297 aa15.31■□□□□ 0.04
NUCKS1-201ENST00000367142 A0A0U1RQJ8 604 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 E2F3O00716 465 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 POP7O75817 140 aaKnown RBP15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 RALGPS1Q5JS13 557 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 MFSD5Q6N075 450 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 RAB11FIP2Q7L804 512 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 DENND6BQ8NEG7 585 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 OR13C4Q8NGS5 318 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 FAM83CQ9BQN1 747 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 KCNH6Q9H252 994 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 SNTG1Q9NSN8 517 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 B4GALT7Q9UBV7 327 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 TP53I11O14683 189 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 HK1P19367 917 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 JAGN1Q8N5M9 183 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 NR4A3Q92570 626 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 ZNF471Q9BX82 626 aaPredicted RBP15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 ZNF224Q9NZL3 707 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 TNFRSF10DQ9UBN6 386 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 RPP14O95059 124 aaKnown RBP15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 CHRNA6Q15825 494 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 SLC10A6Q3KNW5 377 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 Q6ZVU0 165 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 ASB6Q9NWX5 421 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 SRRDQ9UH36 339 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 PMF1-BGLAPU3KQ54 211 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 EIF1AYO14602 144 aaKnown RBP15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 UGT1A9O60656 530 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 PPP1R11O60927 126 aaPredicted RBP15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 OAS1P00973 400 aaKnown RBP15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 FHP07954 510 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 ZNF16P17020 682 aaPredicted RBP15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 UGT1A6P19224 532 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 UGT1A4P22310 534 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 POLR2J2Q9GZM3 115 aaKnown RBP15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 UGT1A7Q9HAW7 530 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 UGT1A10Q9HAW8 530 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 UGT1A8Q9HAW9 530 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 STOX2Q9P2F5 926 aaPredicted RBP15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 MAFFQ9ULX9 164 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 SMCO3A2RU48 225 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 PGLSO95336 258 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 SNHG28P0DPA3 235 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 BMP8BP34820 402 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 SYT16Q17RD7 645 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 GPR153Q6NV75 609 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 C3orf33Q6P1S2 294 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 CLEC20AQ6ZU45 233 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 SSX6Q7RTT6 188 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 BMP8AQ7Z5Y6 402 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 ZER1Q7Z7L7 766 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 TMCO6Q96DC7 493 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 ZDHHC12Q96GR4 267 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 SAMD11Q96NU1 681 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 CHIAQ9BZP6 476 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 GKN1Q9NS71 199 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 SLC45A1Q9Y2W3 748 aa15.3■□□□□ 0.04
NUCKS1-201ENST00000367142 ZNF99A8MXY4 864 aaPredicted RBP15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 BCHEP06276 602 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 CBLBQ13191 982 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 C1orf94Q6P1W5 598 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 THEM6Q8WUY1 208 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 LENG8Q96PV6 779 aaPredicted RBP15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 SLC29A3Q9BZD2 475 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 COMMD3Q9UBI1 195 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 NOBOXO60393 691 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 H1F0P07305 194 aaKnown RBP15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 CCL14Q16627 93 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 TFAP2BQ92481 460 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 RBP7Q96R05 134 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 WDR77Q9BQA1 342 aaPredicted RBP15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 GATA5Q9BWX5 397 aaPredicted RBP15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 CFAP20Q9Y6A4 193 aaKnown RBP15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 GRM2Q14416 872 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 CDK10Q15131 360 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 ITPRIPL2Q3MIP1 535 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 PRRT3Q5FWE3 981 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 OR5AK3PQ8NH89 298 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 TIMMDC1Q9NPL8 285 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 SPATA6Q9NWH7 488 aaPredicted RBP15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 KDM4BO94953 1096 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 HERV-K104P61576 105 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 CARTPTQ16568 116 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 SCGB2B2Q4G0G5 96 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 EGFLAMQ63HQ2 1017 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 TXNDC8Q6A555 127 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 LYSMD3Q7Z3D4 306 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 ABHD5Q8WTS1 349 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 CCSER2Q9H7U1 834 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 WNT6Q9Y6F9 365 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 ZSCAN5BA6NJL1 495 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 CYP11A1P05108 521 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 HLA-DQB2P05538 268 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 ETS2P15036 469 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 ATF6P18850 670 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 IMPDH1P20839 514 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 CHRNA4P43681 627 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms