RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 FOXO6A8MYZ6 492 aa11.72□□□□□ -0.53
CDC42BPA-203ENST00000366766 DCLK1O15075 740 aa11.72□□□□□ -0.53
CDC42BPA-203ENST00000366766 NCK1P16333 377 aa11.72□□□□□ -0.53
CDC42BPA-203ENST00000366766 NELFEP18615 380 aaKnown RBP11.72□□□□□ -0.53
CDC42BPA-203ENST00000366766 OGDHQ02218 1023 aa11.72□□□□□ -0.53
CDC42BPA-203ENST00000366766 SLBPQ14493 270 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF792Q3KQV3 632 aa11.72□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF678Q5SXM1 525 aa11.72□□□□□ -0.53
CDC42BPA-203ENST00000366766 SYCE2Q6PIF2 218 aa11.72□□□□□ -0.53
CDC42BPA-203ENST00000366766 OR10H4Q8NGA5 316 aa11.72□□□□□ -0.53
CDC42BPA-203ENST00000366766 DEFB118Q96PH6 123 aa11.72□□□□□ -0.53
CDC42BPA-203ENST00000366766 CDC14AQ9UNH5 594 aa11.72□□□□□ -0.53
CDC42BPA-203ENST00000366766 GSRP00390 522 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 NCBP2P52298 156 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 FAM46DQ8NEK8 389 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 CREB3L1Q96BA8 519 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 MGAT4BQ9UQ53 548 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 CDH10Q9Y6N8 788 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 HCN1O60741 890 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 RENP00797 406 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 ITPKBP27987 946 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 TXNRD3NBQ6F5E7 133 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 HERVK_113Q902F9 699 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 RAB7BQ96AH8 199 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 MARK1Q9P0L2 795 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 NT5C1B-RDH14C9J2C7 533 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 OR4Q2P0C623 313 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 HTR1EP28566 365 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 ST3GAL3Q11203 375 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 BAIAP2L2Q6UXY1 529 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 SAPCD2Q86UD0 394 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 GTPBP3Q969Y2 492 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 METTL2AQ96IZ6 378 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 GMLQ99445 158 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZCCHC3Q9NUD5 404 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 DAPL1A0PJW8 107 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 ENGP17813 658 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 IL12BP29460 328 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 ADAM15Q13444 863 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 PCDHAC1Q9H158 963 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF696Q9H7X3 374 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 IKZF2Q9UKS7 526 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 SNNO75324 88 aaPredicted RBP11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 MATN4O95460 622 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 NT5EP21589 574 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 CLCN7P51798 805 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 RPS24P62847 133 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 LYSMD3Q7Z3D4 306 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 PLEKHO2Q8TD55 490 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 PEBP4Q96S96 227 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 KCNH6Q9H252 994 aa11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 RPF2Q9H7B2 306 aaKnown RBP11.71□□□□□ -0.53
CDC42BPA-203ENST00000366766 PRODHO43272 600 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 ANO7Q6IWH7 933 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 GID4Q8IVV7 300 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 PHTF2Q8N3S3 785 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 RNF31Q96EP0 1072 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 NDC1Q9BTX1 674 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 CCDC106Q9BWC9 280 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 MCM3APO60318 1980 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 PGLSO95336 258 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 ARSFP54793 590 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 TSC22D1Q15714 1073 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 CXorf57Q6NSI4 855 aaKnown RBP11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 MNTQ99583 582 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 SLC30A2Q9BRI3 323 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 YIPF1Q9Y548 306 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 MYLK3Q32MK0 819 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 CNKSR3Q6P9H4 555 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 NANOGNBQ7Z5D8 188 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 ARL14EPQ8N8R7 260 aaPredicted RBP11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 DCBLD1Q8N8Z6 715 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 OR14C36Q8NHC7 312 aa11.71□□□□□ -0.54
CDC42BPA-203ENST00000366766 ACVR2AP27037 513 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 SEPHS1P49903 392 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 PLCZ1Q86YW0 608 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 NETO2Q8NC67 525 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 ZSWIM3Q96MP5 696 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 IFT27Q9BW83 186 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 LIPT1Q9Y234 373 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 OARD1Q9Y530 152 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 INSL6Q9Y581 213 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 CDK6Q00534 326 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 UPP1Q16831 310 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 FAM180AQ6UWF9 173 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 ISLR2Q6UXK2 745 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 FAM156AQ8NDB6 213 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 CEP290O15078 2479 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 INMTO95050 263 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 CPN2P22792 545 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 RBM34P42696 430 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 GRSF1Q12849 480 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 NAT16Q8N8M0 369 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 SLC5A11Q8WWX8 675 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 POLMQ9NP87 494 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 WDR37Q9Y2I8 494 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 ARVCFO00192 962 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 TLR4O00206 839 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 SCN2BO60939 215 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms