RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 HMGCS1Q01581 520 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 PGM2L1Q6PCE3 622 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 OSTF1Q92882 214 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 DNAJC5Q9H3Z4 198 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 H0Y858 1186 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 FZD9O00144 591 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 CCR4P51679 360 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 ARFIP1P53367 373 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 LINC00299Q6ZSB3 139 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 CORO1BQ9BR76 489 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 OR10H1Q9Y4A9 318 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 OAS3Q9Y6K5 1087 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 SH3D21A4FU49 640 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 ENTPD6O75354 484 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 PROX2Q3B8N5 592 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 GDPGP1Q6ZNW5 385 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 CITED4Q96RK1 184 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 EVLQ9UI08 416 aaPredicted RBP11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 OARD1Q9Y530 152 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 PLEKHS1Q5SXH7 462 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 CEP97Q8IW35 865 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 TMEM74Q96NL1 305 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 TRIM36Q9NQ86 728 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 C14orf105Q9NVL8 296 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 FAM118AQ9NWS6 357 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 AASSQ9UDR5 926 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 MGAT4BQ9UQ53 548 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 ZNF451Q9Y4E5 1061 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 SLC1A7O00341 560 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 IL7RP16871 459 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 GGT1P19440 569 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 YAP1P46937 504 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 OMPP47874 163 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 DIO3P55073 304 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 TRAM1Q15629 374 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 FBXO48Q5FWF7 155 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 IRAK1BP1Q5VVH5 260 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 LIPJQ5W064 366 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 PLEKHG7Q6ZR37 379 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 SLC51AQ86UW1 340 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 OR6K2Q8NGY2 324 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 SLC35G5Q96KT7 338 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 FRMD6Q96NE9 622 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 HEPHQ9BQS7 1158 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 DSTNP60981 165 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 DEFB132Q7Z7B7 95 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 DCAF4L2Q8NA75 395 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 CDK6Q00534 326 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 ZNF763Q0D2J5 394 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 SOCS2O14508 198 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 GRB14Q14449 540 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 CRB2Q5IJ48 1285 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 LINGO4Q6UY18 593 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 CIR1Q86X95 450 aaPredicted RBP11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 RGMAQ96B86 450 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 CCDC32Q9BV29 185 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 BTBD1Q9H0C5 482 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 RIMS3Q9UJD0 308 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 PRAMEF12O95522 483 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 DSG2Q14126 1118 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 MEP1AQ16819 746 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 DPY19L2P1Q6NXN4 242 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 RANBP10Q6VN20 620 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 OR8H1Q8NGG4 311 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 HAVCR1Q96D42 359 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 METTL2AQ96IZ6 378 aaKnown RBP11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 TRIM2Q9C040 744 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 DNAJC15Q9Y5T4 150 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 AP1G1O43747 822 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 CFL1P23528 166 aaKnown RBP11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 GABRR2P28476 465 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 SYT16Q17RD7 645 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 LYSMD3Q7Z3D4 306 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 OR4C6Q8NH72 309 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 ADAMTS5Q9UNA0 930 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 GLUD1P00367 558 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 DGKGP49619 791 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 TAS2R43P59537 309 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 FBXO22Q8NEZ5 403 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 CNTN5O94779 1100 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 OR56A1Q8NGH5 318 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 S100A13Q99584 98 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 DOCK1Q14185 1865 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 C11orf91Q3C1V1 193 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 SPRYD7Q5W111 196 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 GET4Q7L5D6 327 aaPredicted RBP11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 DENND6BQ8NEG7 585 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 OR13J1Q8NGT2 312 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 DOHHQ9BU89 302 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 SUV39H2Q9H5I1 410 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 A0A1W2PRB8 838 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 NEDD8-MDP1E9PL57 170 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 MAFKO60675 156 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 PSKH1P11801 424 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 WFIKKN2Q8TEU8 576 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 MRPS23Q9Y3D9 190 aaKnown RBP11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 OR2AG2A6NM03 316 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 HOXD8P13378 290 aaPredicted RBP11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 TMIEQ8NEW7 156 aa11.47□□□□□ -0.57
CDC42BPA-202ENST00000366764 TMEM80Q96HE8 168 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms