RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 PDE10AQ9Y233 779 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 B3GNT3Q9Y2A9 372 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 DOCK10Q96BY6 2186 aa13.02□□□□□ -0.33
TNFRSF1A-202ENST00000366159 HAT1O14929 419 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 FANCGO15287 622 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ALOX12BO75342 701 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 VPS4BO75351 444 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 IPO13O94829 963 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CCNDBP1O95273 360 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ALPPP05187 535 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PYGBP11216 843 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 GNLYP22749 145 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CARSP49589 748 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CBLBQ13191 982 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 DSG2Q14126 1118 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ZXDCQ2QGD7 858 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 VWA2Q5GFL6 755 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 RBM20Q5T481 1227 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TEDDM1Q5T9Z0 273 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 LRRC8EQ6NSJ5 796 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 UGT3A1Q6NUS8 523 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 HIBCHQ6NVY1 386 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PAQR3Q6TCH7 311 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 Q6ZS92 163 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 LAPTM4BQ86VI4 370 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CSNK1A1LQ8N752 337 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 AMER3Q8N944 861 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 COL26A1Q96A83 441 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CERS2Q96G23 380 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PWWP2AQ96N64 755 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PSMG3-AS1Q96PY0 264 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 NDNQ99608 321 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TGIF2Q9GZN2 237 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TMEM184CQ9NVA4 438 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TAS2R13Q9NYV9 303 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 LUZP4Q9P127 313 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 VPS4AQ9UN37 437 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TEX264Q9Y6I9 313 aa13.01□□□□□ -0.33
TNFRSF1A-202ENST00000366159 KCNE1BA0A087WTH5 132 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TCP11X1B4DZS4 312 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 H7BY64 318 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SLC16A5O15375 505 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 P2RX6O15547 441 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SYF2O95926 243 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 C8GP07360 202 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 HRH2P25021 359 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 VARSP26640 1264 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 EFNA3P52797 238 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SP140Q13342 867 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 FAM53BQ14153 422 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 FRG1Q14331 258 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 MORF4L2Q15014 288 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 BBS9Q3SYG4 887 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TUBB8Q3ZCM7 444 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 STEAP4Q687X5 459 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SYDE1Q6ZW31 735 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 VN1R4Q7Z5H5 301 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 MIEF2Q96C03 454 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SNRNP40Q96DI7 357 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 C19orf60Q96EN9 201 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CABS1Q96KC9 395 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CCDC138Q96M89 665 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PRAP1Q96NZ9 151 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CRB3Q9BUF7 120 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PARVBQ9HBI1 364 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SLAMF7Q9NQ25 335 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 UTP6Q9NYH9 597 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SLC17A6Q9P2U8 582 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TRMT6Q9UJA5 497 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CDC14AQ9UNH5 594 aa13□□□□□ -0.33
TNFRSF1A-202ENST00000366159 RP1L1Q8IWN7 2480 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TXNDC9O14530 226 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 HPP00738 406 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 FBLP22087 321 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ITGA3P26006 1051 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ELK3P41970 407 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TBPL1P62380 186 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 OCA2Q04671 838 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TSTA3Q13630 321 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 RBBP7Q16576 425 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PHKG1Q16816 387 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TRMT10BQ6PF06 316 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 MBOAT1Q6ZNC8 495 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CUZD1Q86UP6 607 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PLD3Q8IV08 490 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 MCOLN3Q8TDD5 553 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 LRRC39Q96DD0 335 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TM4SF19Q96DZ7 209 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SGPP1Q9BX95 441 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 LHPPQ9H008 270 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CCDC177Q9NQR7 707 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 C3orf18Q9UK00 162 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SH2B3Q9UQQ2 575 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 MRPS2Q9Y399 296 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CSAG2Q9Y5P2 127 aa12.99□□□□□ -0.33
TNFRSF1A-202ENST00000366159 LOC102723996A0A087X1L8 192 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 IDSB3KWA1 339 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 NPPBP16860 134 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms