RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 REP15Q6BDI9 236 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 UGT3A1Q6NUS8 523 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 DUX4L9Q6RFH8 374 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 SDCCAG8Q86SQ7 713 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 AMIGO1Q86WK6 493 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 CARM1Q86X55 608 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 AFAP1Q8N556 730 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 FAM89BQ8N5H3 189 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZNF709Q8N972 641 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 TRIML1Q8N9V2 468 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 OR5M8Q8NGP6 311 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 SLC22A8Q8TCC7 542 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 RNF128Q8TEB7 428 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 STYXQ8WUJ0 223 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 STAG1Q8WVM7 1258 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 KCNE4Q8WWG9 221 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 C11orf52Q96A22 123 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 TTC17Q96AE7 1141 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 PABPC5Q96DU9 382 aaKnown RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 RBM18Q96H35 190 aaKnown RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 SPATA17Q96L03 361 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 TMEM68Q96MH6 324 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 FAM218AQ96MZ4 157 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 CCT8L2Q96SF2 557 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 GFI1Q99684 422 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 RTFDC1Q9BY42 306 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 NMNAT2Q9BZQ4 307 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 NMUR2Q9GZQ4 415 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 S1PR5Q9H228 398 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 ARRDC1-AS1Q9H2J1 176 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 PIGMQ9H3S5 423 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 HHATLQ9HCP6 504 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 CWC15Q9P013 229 aaKnown RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 DUX4Q9UBX2 424 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 DBNLQ9UJU6 430 aaKnown RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 HSF4Q9ULV5 492 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 MGAT4AQ9UM21 535 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 SPATA2Q9UM82 520 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 SATB2Q9UPW6 733 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 B3GALT5Q9Y2C3 310 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 R3HDM2Q9Y2K5 976 aaKnown RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 CLIC4Q9Y696 253 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 COL11A1P12107 1806 aaPredicted RBP-0.22□□□□□ -2.45
RNU6-54P-201ENST00000365563 KIAA1217Q5T5P2 1943 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 ZNF469Q96JG9 3925 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 TRAV40A0A0B4J280 105 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 IGKV2-24A0A0C4DH68 120 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 IQANK1A0A1B0GTG1 560 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 GOLGA6L3A6NEY3 463 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 FAM90A7PA6NKC0 464 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 LRRC53A6NM62 1247 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 FOXI3A8MTJ6 420 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 FAM90A22PA8MWA6 464 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 FAM90A12PA8MX19 464 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 FAM90A23PA8MXZ1 464 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 K7EQG2 157 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 O00370 1275 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 ATP2A1O14983 1001 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 INPP4BO15327 924 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 NBR2O15453 112 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 LRRTM2O43300 516 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 ZNF749O43361 778 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 TLX2O43763 284 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 SERF1AO75920 110 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 SEMA4FO95754 770 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 ICAM1P05362 532 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 RPLP0P05388 317 aaKnown RBP-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 GLAP06280 429 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 IGFBP3P17936 291 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 TRIM21P19474 475 aaKnown RBP-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 WARSP23381 471 aaKnown RBP-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 TNFSF4P23510 183 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 GPR183P32249 361 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 HSPA4P34932 840 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 DNA2P51530 1060 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 TRIM29Q14134 588 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 FASTKQ14296 549 aaKnown RBP-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 GCKRQ14397 625 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 STARD3Q14849 445 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 RPS6KA1Q15418 735 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 TAF5Q15542 800 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 NAB2Q15742 525 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 MLF2Q15773 248 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 ODF4Q2M2E3 257 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 LETM2Q2VYF4 491 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 ITPRIPL2Q3MIP1 535 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 ALDH1L2Q3SY69 923 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 POM121L1PQ3SYA9 428 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 IZUMO3Q5VZ72 239 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 LIPJQ5W064 366 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 TMEM198Q66K66 360 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 GSTA5Q7RTV2 222 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 SYTL1Q8IYJ3 562 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 CFAP206Q8IYR0 622 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 TTC5Q8N0Z6 440 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 CEND1Q8N111 149 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 GPR137CQ8N3F9 429 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 THAP8Q8NA92 274 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 RNF149Q8NC42 400 aa-0.23□□□□□ -2.45
RNU6-54P-201ENST00000365563 OR9Q2Q8NGE9 314 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms