RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SNX7Q9UNH6 387 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 COL22A1Q8NFW1 1626 aaPredicted RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 NOTOA8MTQ0 251 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 GJB5O95377 273 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 TCEA1P23193 301 aaKnown RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 NPRL3Q12980 569 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 CLEC12AQ5QGZ9 265 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 ADGRF1Q5T601 910 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 SCD5Q86SK9 330 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 AQP11Q8NBQ7 271 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 CHDHQ8NE62 594 aaPredicted RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 SGCDQ92629 289 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 ARMC5Q96C12 935 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 PSKH2Q96QS6 385 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 INPP5KQ9BT40 448 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 MS4A12Q9NXJ0 267 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 NME7Q9Y5B8 376 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 USP54Q70EL1 1684 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 NEDD8-MDP1E9PL57 170 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 DUSP11O75319 330 aaKnown RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 RFPL2O75678 378 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 PDYNP01213 254 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 HOXB6P17509 224 aaKnown RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 POLR2EP19388 210 aaKnown RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 GADD45AP24522 165 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 ABATP80404 500 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 SCARB2Q14108 478 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 TEAD4Q15561 434 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 DUOXA1Q1HG43 343 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 SPRYD7Q5W111 196 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 Q6ZNX1 250 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 DCP2Q8IU60 420 aaKnown RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 DBF4BQ8NFT6 615 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 AP3S1Q92572 193 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 UBXN10Q96LJ8 280 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 TEFMQ96QE5 360 aaKnown RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 ATOH8Q96SQ7 321 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 FEVQ99581 238 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 SLC30A2Q9BRI3 323 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 SLC35A5Q9BS91 424 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 WRAP53Q9BUR4 548 aaKnown RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 ZCCHC2Q9C0B9 1178 aaKnown RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 MMP27Q9H306 513 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 GPR83Q9NYM4 423 aa13.51□□□□□ -0.25
COL6A1-201ENST00000361866 DNMT3AQ9Y6K1 912 aaPredicted RBP13.51□□□□□ -0.25
COL6A1-201ENST00000361866 CDRT1O95170 752 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 ARNTP27540 789 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 AP1S1P61966 158 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 STX4Q12846 297 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 VMACQ2NL98 169 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 NEK10Q6ZWH5 1172 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 CLECL1Q8IZS7 167 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 GOLM1Q8NBJ4 401 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 NFKBIDQ8NI38 313 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 ZNF607Q96SK3 696 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 IRF2BPLQ9H1B7 796 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 GULP1Q9UBP9 304 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 TMED5Q9Y3A6 229 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 A0A096LPI6 279 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 ZNF701M0R085 212 aaPredicted RBP13.5□□□□□ -0.25
COL6A1-201ENST00000361866 SLC30A4O14863 429 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 ELFN1P0C7U0 828 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 EBLN1P0CF75 366 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 PTNP21246 168 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 HTR1BP28222 390 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 C21orf33P30042 268 aaPredicted RBP13.5□□□□□ -0.25
COL6A1-201ENST00000361866 UBXN11Q5T124 520 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL6A1-201ENST00000361866 UBE2UQ5VVX9 321 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 FAM180BQ6P0A1 224 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 ELMSAN1Q6PJG2 1045 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 ASB18Q6ZVZ8 466 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 MTSS1LQ765P7 747 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 KRT78Q8N1N4 520 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 ZBTB20Q9HC78 741 aaPredicted RBP13.5□□□□□ -0.25
COL6A1-201ENST00000361866 CD300AQ9UGN4 299 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 ENTPD4Q9Y227 616 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 SCN7AQ01118 1682 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 GJA1P17302 382 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 PPP5CP53041 499 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 TUBA1BP68363 451 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 MED27Q6P2C8 311 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 MZT2AQ6P582 158 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 TUBA1AQ71U36 451 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 CNTN4Q8IWV2 1026 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 TCAIMQ8N3R3 496 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 ZNF366Q8N895 744 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 FBXO22Q8NEZ5 403 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 EGLN2Q96KS0 407 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 COL21A1Q96P44 957 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 GPR78Q96P69 363 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 YIPF4Q9BSR8 244 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 OR51B5Q9H339 312 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 RIMKLBQ9ULI2 386 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 CACNA1CQ13936 2221 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 TRBC2A0A5B9 178 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 SLC35F4A4IF30 521 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 K7ERQ8 282 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 SOCS7O14512 581 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 IFNGR2P38484 337 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms