RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ADRA2AP08913 450 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 HSMCR30P0CW71 290 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 LAMP1P11279 417 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 DGKAP23743 735 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 GADD45AP24522 165 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 ACVR2AP27037 513 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 CD40LGP29965 261 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 SMAD3P84022 425 aaKnown RBP10.26□□□□□ -0.77
SMC3-201ENST00000361804 HIST2H2ACQ16777 129 aaPredicted RBP10.26□□□□□ -0.77
SMC3-201ENST00000361804 UAP1L1Q3KQV9 507 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 KDM4DQ6B0I6 523 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 HIPK1Q86Z02 1210 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 PLD3Q8IV08 490 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 ENTHD1Q8IYW4 607 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 RBFAQ8N0V3 343 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 LILRA3Q8N6C8 439 aaPredicted RBP10.26□□□□□ -0.77
SMC3-201ENST00000361804 CD99L2Q8TCZ2 262 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 ZHX1-C8orf76Q96EF9 292 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 HHIPL1Q96JK4 782 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 P2RY13Q9BPV8 354 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 CWH43Q9H720 699 aa10.26□□□□□ -0.77
SMC3-201ENST00000361804 THUMPD1Q9NXG2 353 aaKnown RBP10.26□□□□□ -0.77
SMC3-201ENST00000361804 DYTNA2CJ06 578 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 EFCAB9A8MZ26 197 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 H7C0S8 307 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 RGS10O43665 173 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 OXSR1O95747 527 aaPredicted RBP10.25□□□□□ -0.77
SMC3-201ENST00000361804 CCDC159P0C7I6 412 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 CD22P20273 847 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 RYKP34925 604 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 IDH2P48735 452 aaKnown RBP10.25□□□□□ -0.77
SMC3-201ENST00000361804 SELENBP1Q13228 472 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 KCNJ8Q15842 424 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 UGT8Q16880 541 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 TXNDC8Q6A555 127 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 ZNF852Q6ZMS4 543 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 UBE2R2Q712K3 238 aaPredicted RBP10.25□□□□□ -0.77
SMC3-201ENST00000361804 CCDC103Q8IW40 242 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 GPR156Q8NFN8 814 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 DACH2Q96NX9 599 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 ASPSCR1Q9BZE9 553 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 KCNH6Q9H252 994 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 DSN1Q9H410 356 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 PALMDQ9NP74 551 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 GPR83Q9NYM4 423 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 RAPGEFL1Q9UHV5 662 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 TSC22D4Q9Y3Q8 395 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 TMEM202A6NGA9 273 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 SYN3O14994 580 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 ETHE1O95571 254 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 HOXB9P17482 250 aaPredicted RBP10.25□□□□□ -0.77
SMC3-201ENST00000361804 CDH18Q13634 790 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 CCSMST1Q4G0I0 132 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 ATG9BQ674R7 924 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 PLEKHG7Q6ZR37 379 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 ZZZ3Q8IYH5 903 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 SYTL1Q8IYJ3 562 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 MCFD2Q8NI22 146 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 PDLIM5Q96HC4 596 aaKnown RBP10.25□□□□□ -0.77
SMC3-201ENST00000361804 Q96MT0 163 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 TTPALQ9BTX7 342 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 OR51E2Q9H255 320 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 DCSTAMPQ9H295 470 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 IL1RAPQ9NPH3 570 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 ATAD3AQ9NVI7 634 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 B3GNT3Q9Y2A9 372 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 J3KTA2 159 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 CNOT3O75175 753 aaKnown RBP10.25□□□□□ -0.77
SMC3-201ENST00000361804 EOMESO95936 686 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 FABP3P05413 133 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 EBLN1P0CF75 366 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 GJA1P17302 382 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 ITGALP20701 1170 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 CLK1P49759 484 aaKnown RBP10.25□□□□□ -0.77
SMC3-201ENST00000361804 ST13P50502 369 aaKnown RBP10.25□□□□□ -0.77
SMC3-201ENST00000361804 CLDN8P56748 225 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 DGUOKQ16854 277 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 POM121L1PQ3SYA9 428 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 C6orf183Q5T699 404 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 KLHL17Q6TDP4 642 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 ARL14EPQ8N8R7 260 aaPredicted RBP10.25□□□□□ -0.77
SMC3-201ENST00000361804 RDH12Q96NR8 316 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 SAMD11Q96NU1 681 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 SMG9Q9H0W8 520 aaKnown RBP10.25□□□□□ -0.77
SMC3-201ENST00000361804 SRRDQ9UH36 339 aa10.25□□□□□ -0.77
SMC3-201ENST00000361804 GRXCR2A6NFK2 248 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 FAM227AF5H4B4 570 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 M0R082 166 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 RFXAPO00287 272 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 RRM2P31350 389 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 SF3B4Q15427 424 aaKnown RBP eCLIP10.24□□□□□ -0.772e-6■■■■□ 20.6
SMC3-201ENST00000361804 CYP2U1Q7Z449 544 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 STK40Q8N2I9 435 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 ACSL6Q9UKU0 697 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 RNF6Q9Y252 685 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 PCDHB1Q9Y5F3 818 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 OR6C75A6NL08 312 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 TBKBP1A7MCY6 615 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 SAP18O00422 153 aaKnown RBP10.24□□□□□ -0.77
SMC3-201ENST00000361804 KCNK2O95069 426 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms