RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 NODALQ96S42 347 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 OSBPL7Q9BZF2 842 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 C1orf21Q9H246 121 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 SPIN1Q9Y657 262 aaPredicted RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 A0A0G2JN53 185 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 FAM92AA1XBS5 289 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 CAPN5O15484 640 aaPredicted RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 PGRP06401 933 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 OR4F3Q6IEY1 312 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 SLC30A6Q6NXT4 461 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 ATP6V1C2Q8NEY4 427 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 TMEM174Q8WUU8 243 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 COMMD9Q9P000 198 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 RPL36Q9Y3U8 105 aaKnown RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 PCDHGB1Q9Y5G3 927 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 RNGTTO60942 597 aaKnown RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 PRKAR1AP10644 381 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 ENDOUP21128 410 aaKnown RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 ADARP55265 1226 aaKnown RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 CDK6Q00534 326 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 ENPP2Q13822 863 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 QPRTQ15274 297 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.09□□□□□ -0.31
LDB3-202ENST00000361373 NCEH1Q6PIU2 408 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 ZNF852Q6ZMS4 543 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 C12orf40Q86WS4 652 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 GPR65Q8IYL9 337 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 PDPRQ8NCN5 879 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 MCFD2Q8NI22 146 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 IPCEF1Q8WWN9 437 aaPredicted RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 ZNF570Q96NI8 536 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 GINS4Q9BRT9 223 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 IFT27Q9BW83 186 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 STRADBQ9C0K7 418 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 NOL6Q9H6R4 1146 aaKnown RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 DIABLOQ9NR28 239 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 OARD1Q9Y530 152 aa13.09□□□□□ -0.31
LDB3-202ENST00000361373 CFAP20Q9Y6A4 193 aaKnown RBP13.09□□□□□ -0.31
LDB3-202ENST00000361373 UBR2Q8IWV8 1755 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 TCRBV21S2A2A0A5A6 115 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 CCDC182A6NF36 153 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 MATN2O00339 956 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 TRMUO75648 421 aaKnown RBP13.08□□□□□ -0.31
LDB3-202ENST00000361373 NADKO95544 446 aaPredicted RBP13.08□□□□□ -0.31
LDB3-202ENST00000361373 NCK1P16333 377 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 CXCR1P25024 350 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 DNAJA1P31689 397 aaKnown RBP13.08□□□□□ -0.31
LDB3-202ENST00000361373 ETV3P41162 512 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 STK19P49842 368 aaPredicted RBP13.08□□□□□ -0.31
LDB3-202ENST00000361373 MPP7Q5T2T1 576 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 EMC10Q5UCC4 262 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 TMEM198Q66K66 360 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 NPAS3Q8IXF0 933 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 KBTBD2Q8IY47 623 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 NCSTNQ92542 709 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 TRIM63Q969Q1 353 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 HAPLN2Q9GZV7 340 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 PDE10AQ9Y233 779 aa13.08□□□□□ -0.31
LDB3-202ENST00000361373 FAM149AA5PLN7 773 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 SCDO00767 359 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 MYCLP1P12525 358 aaPredicted RBP13.08□□□□□ -0.32
LDB3-202ENST00000361373 EFNA1P20827 205 aaPredicted RBP13.08□□□□□ -0.32
LDB3-202ENST00000361373 TARDBPQ13148 414 aaKnown RBP eCLIP13.08□□□□□ -0.32
LDB3-202ENST00000361373 SNTA1Q13424 505 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 RNF31Q96EP0 1072 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 JSRP1Q96MG2 331 aaPredicted RBP13.08□□□□□ -0.32
LDB3-202ENST00000361373 GPER1Q99527 375 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 PELOQ9BRX2 385 aaKnown RBP13.08□□□□□ -0.32
LDB3-202ENST00000361373 COMMD4Q9H0A8 199 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 A0A1W2PP55 124 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 A0A1W2PQU0 124 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 LYNP07948 512 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 PRRT3Q5FWE3 981 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 SCAMP4Q969E2 229 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 GTPBP3Q969Y2 492 aaKnown RBP13.08□□□□□ -0.32
LDB3-202ENST00000361373 OR52B2Q96RD2 323 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 NKX2-4Q9H2Z4 354 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 HRASLS2Q9NWW9 162 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 PDE4DIPQ5VU43 2346 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 C1GALT1C1LP0DN25 315 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 OC90Q02509 493 aaPredicted RBP13.08□□□□□ -0.32
LDB3-202ENST00000361373 ISLR2Q6UXK2 745 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 TMCO2Q7Z6W1 182 aaPredicted RBP13.08□□□□□ -0.32
LDB3-202ENST00000361373 NEK7Q8TDX7 302 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 SEC14L1Q92503 715 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 RTP4Q96DX8 246 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 WBP11Q9Y2W2 641 aaKnown RBP13.08□□□□□ -0.32
LDB3-202ENST00000361373 NUP98P52948 1817 aa13.08□□□□□ -0.32
LDB3-202ENST00000361373 RCBTB2O95199 551 aa13.07□□□□□ -0.32
LDB3-202ENST00000361373 SDC2P34741 201 aa13.07□□□□□ -0.32
LDB3-202ENST00000361373 PREPP48147 710 aa13.07□□□□□ -0.32
LDB3-202ENST00000361373 RPS13P62277 151 aaKnown RBP13.07□□□□□ -0.32
LDB3-202ENST00000361373 PCLAFQ15004 111 aa13.07□□□□□ -0.32
LDB3-202ENST00000361373 SLC5A9Q2M3M2 681 aa13.07□□□□□ -0.32
LDB3-202ENST00000361373 PDSS1Q5T2R2 415 aa13.07□□□□□ -0.32
LDB3-202ENST00000361373 DNM1P34Q6PK57 102 aa13.07□□□□□ -0.32
LDB3-202ENST00000361373 FAM180AQ6UWF9 173 aa13.07□□□□□ -0.32
LDB3-202ENST00000361373 C9orf43Q8TAL5 461 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms