RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 RBM48Q5RL73 367 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 HENMT1Q5T8I9 393 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 TTC23Q5W5X9 447 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 MSANTD1Q6ZTZ1 278 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 ZDHHC13Q8IUH4 622 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 CROCCP3Q8IVE0 287 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 PJA1Q8NG27 643 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 FAM3CQ92520 227 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 PYCR2Q96C36 320 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 FBXL8Q96CD0 374 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 CMTM7Q96FZ5 175 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 SHDQ96IW2 340 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 OR52E6Q96RD3 313 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 PRRX2Q99811 253 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 ZSCAN5AQ9BUG6 496 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 THUMPD3Q9BV44 507 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 MTG2Q9H4K7 406 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 C8orf33Q9H7E9 229 aaPredicted RBP13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 CXorf21Q9HAI6 301 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 LTB4R2Q9NPC1 389 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 SLC25A37Q9NYZ2 338 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 NDRG2Q9UN36 371 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 DLGAP4Q9Y2H0 992 aa13.84□□□□□ -0.19
NIPAL3-203ENST00000358028 A0A096LPI6 279 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 CPNE6O95741 557 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 MT-ND1P03886 318 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 GSTM1P09488 218 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 GLULP15104 373 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 ITPKAP23677 461 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 MAPK1P28482 360 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 NEK2P51955 445 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 GSTM4Q03013 218 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 TCF15Q12870 199 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 UBXN2BQ14CS0 331 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 ZNF284Q2VY69 593 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 PYCR3Q53H96 274 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 ZNF805Q5CZA5 627 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 LRIF1Q5T3J3 769 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 ZNF648Q5T619 568 aaPredicted RBP13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 ZNF773Q6PK81 442 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 TBPL2Q6SJ96 375 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 ZNF852Q6ZMS4 543 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 RAVER1Q8IY67 606 aaKnown RBP13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 MICU2Q8IYU8 434 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 OFCC1Q8IZS5 231 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 BEND7Q8N7W2 519 aaPredicted RBP13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 ASZ1Q8WWH4 475 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 FIG4Q92562 907 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 RMND5AQ9H871 391 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 DKK3Q9UBP4 350 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 ADGRE2Q9UHX3 823 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 SLC22A14Q9Y267 594 aa13.83□□□□□ -0.19
NIPAL3-203ENST00000358028 KRT87PA6NCN2 255 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 TRIM64BA6NI03 449 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 OR2AG2A6NM03 316 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 G3V2T6 193 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 H0Y858 1186 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 QSOX1O00391 747 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 CXCR6O00574 342 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 AREL1O15033 823 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 PRAMEF4O60810 478 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 SLCO2B1O94956 709 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 SRPRAP08240 638 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 S100A3P33764 101 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 HALP42357 657 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 VASPP50552 380 aaPredicted RBP13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 PFN3P60673 137 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 GRSF1Q12849 480 aaKnown RBP eCLIP13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 PON2Q15165 354 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 LDLRAP1Q5SW96 308 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 PRAMEF9Q5VWM5 478 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 TMEM214Q6NUQ4 689 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 DNAJC14Q6Y2X3 702 aaPredicted RBP13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 TECPR1Q7Z6L1 1165 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 C12orf40Q86WS4 652 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 CALHM3Q86XJ0 350 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 ZNF687Q8N1G0 1237 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 CLEC4FQ8N1N0 589 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 TMEM105Q8N8V8 129 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 OR10A6Q8NH74 314 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 HCAR2Q8TDS4 363 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 BTN2A2Q8WVV5 523 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 C12orf43Q96C57 262 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 SLC47A1Q96FL8 570 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 MSANTD3Q96H12 275 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 ITCHQ96J02 903 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 LRIG1Q96JA1 1093 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 VPS35Q96QK1 796 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 PAIP1Q9H074 479 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 ATG10Q9H0Y0 220 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 IKZF5Q9H5V7 419 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 POLR1BQ9H9Y6 1135 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 IFT80Q9P2H3 777 aaPredicted RBP13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 FBXO10Q9UK96 956 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 TMED5Q9Y3A6 229 aa13.83□□□□□ -0.2
NIPAL3-203ENST00000358028 DMDP11532 3685 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 C16orf96A6NNT2 1141 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 MAN2B1O00754 1011 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 RECQL5O94762 991 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 DCNP07585 359 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms