RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ENDOUP21128 410 aaKnown RBP5.4□□□□□ -1.55
PTPRD-202ENST00000356435 FBLP22087 321 aaKnown RBP5.4□□□□□ -1.55
PTPRD-202ENST00000356435 PRKCHP24723 683 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 EDNRAP25101 427 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 MARCKSL1P49006 195 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 TLE2Q04725 743 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 FGL2Q14314 439 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF792Q3KQV3 632 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 RUNDC3AQ59EK9 446 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 ARSIQ5FYB1 569 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 LBX2Q6XYB7 198 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 TMCO2Q7Z6W1 182 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-202ENST00000356435 NXPE1Q8N323 547 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 LINC00471Q8N535 108 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 TP53INP1Q96A56 240 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 SHISA4Q96DD7 197 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 CPXM1Q96SM3 734 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 SLC35A5Q9BS91 424 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 SLC5A7Q9GZV3 580 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 OR51V1Q9H2C8 321 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 SEC61A2Q9H9S3 476 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 UNCXA6NJT0 531 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 RCBTB2O95199 551 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 ABRAXAS2Q15018 415 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 SEC23BQ15437 767 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 KHDC1Q4VXA5 237 aaKnown RBP5.4□□□□□ -1.55
PTPRD-202ENST00000356435 PRPF38BQ5VTL8 546 aaKnown RBP5.4□□□□□ -1.55
PTPRD-202ENST00000356435 PAOXQ6QHF9 649 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 FAM46DQ8NEK8 389 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 SLC44A1Q8WWI5 657 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 FCGR1BQ92637 280 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 PSMG2Q969U7 264 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 MOAP1Q96BY2 351 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 SFXN1Q9H9B4 322 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 SIX2Q9NPC8 291 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 CHRAC1Q9NRG0 131 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 SPATA7Q9P0W8 599 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 EIF3KQ9UBQ5 218 aaKnown RBP5.4□□□□□ -1.55
PTPRD-202ENST00000356435 RAB26Q9ULW5 256 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 ADAM18Q9Y3Q7 739 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 FADS3Q9Y5Q0 445 aa5.4□□□□□ -1.55
PTPRD-202ENST00000356435 KANTRA0A1W2PQU2 76 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 A0A1W2PRB8 838 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TFECO14948 347 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 KHNYNO15037 678 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SLC22A2O15244 555 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 NPHS1O60500 1241 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 KRT36O76013 467 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 DSTNP60981 165 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CDK10Q15131 360 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CNPY1Q3B7I2 92 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 KIAA0930Q6ICG6 404 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 P2RY8Q86VZ1 359 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF101Q8IZC7 436 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 FN3KQ9H479 309 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TRIM36Q9NQ86 728 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SRRDQ9UH36 339 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 FBXW11Q9UKB1 542 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 MAU2Q9Y6X3 613 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 FTCDNL1E5RQL4 147 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PLOD2O00469 737 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ORC5O43913 435 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SCGB1D2O95969 90 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 GPIP06744 558 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF35P13682 527 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 BDKRB1P46663 353 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 LILRA4P59901 499 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 RPS14P62263 151 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SIM2Q14190 667 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 IQCCQ4KMZ1 466 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 USP43Q70EL4 1123 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 LIX1LQ8IVB5 337 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 FAM86B1Q8N7N1 296 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 INO80EQ8NBZ0 244 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 NETO2Q8NC67 525 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 GSTCDQ8NEC7 633 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 NXNL1Q96CM4 212 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PIWIL1Q96J94 861 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 POLR2J3Q9H1A7 115 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM184CQ9NVA4 438 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF180Q9UJW8 692 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 BACE2Q9Y5Z0 518 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PRAMEF33A0A0G2JMD5 474 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 hCG_2039718K7EN88 272 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PRAMEF10O60809 474 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 OR4F21O95013 312 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ZBTB11O95625 1053 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ITGA5P08648 1049 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF16P17020 682 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 MATN1P21941 496 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CLCNKAP51800 687 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 XKP51811 444 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 WDR4P57081 412 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 RBM48Q5RL73 367 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ADGRF1Q5T601 910 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CLEC6AQ6EIG7 209 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 RNF19BQ6ZMZ0 732 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CNTD1Q8N815 330 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SNIP1Q8TAD8 396 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 UNC93B1Q9H1C4 597 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms