RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 SLC22A2O15244 555 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 MT-CYBP00156 380 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 STATHP02808 62 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 PRKACGP22612 351 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 SMSP52788 366 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 HERV-K104P61576 105 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 CREB5Q02930 508 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 CAPSQ13938 189 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 RBM18Q96H35 190 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 ABCG4Q9H172 646 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 MS4A12Q9NXJ0 267 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 DNAJC27Q9NZQ0 273 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 FCF1Q9Y324 198 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 CENPBD1B2RD01 187 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 MRPL3P09001 348 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 GNRHRP30968 328 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 SLC26A5P58743 744 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 DUSP4Q13115 394 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 SLC2A7Q6PXP3 512 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 SMARCD2Q92925 531 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 KLHL15Q96M94 604 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 TMEM209Q96SK2 561 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 CPXM1Q96SM3 734 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 SACM1LQ9NTJ5 587 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 IGSF9Q9P2J2 1179 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 ERVK-18Q9QC07 812 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 KCNS2Q9ULS6 477 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 PCDHGA8Q9Y5G5 932 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 A8MUA0 341 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 FOXD2O60548 495 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 PABPC4LP0CB38 370 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 GTF2F2P13984 249 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 SNRPD2P62316 118 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 PIGFQ07326 219 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 MOB2Q70IA6 237 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 FNDC8Q8TC99 324 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 GATA5Q9BWX5 397 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 IDI2Q9BXS1 227 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 ZNF395Q9H8N7 513 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 PAQR5Q9NXK6 330 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 SPATA7Q9P0W8 599 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 NT5C1B-RDH14C9J2C7 533 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 FANCGO15287 622 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 PCDH7O60245 1069 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 C8BP07358 591 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 PRPS2P11908 318 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 FUT2Q10981 343 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 UGCGQ16739 394 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 FBXO43Q4G163 708 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 CRTC1Q6UUV9 634 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 SMG8Q8ND04 991 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 OR8K3Q8NH51 312 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 TIFAQ96CG3 184 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 ASB9Q96DX5 294 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 TMEM68Q96MH6 324 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 KREMEN1Q96MU8 473 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 ZNF558Q96NG5 402 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 PPIL3Q9H2H8 161 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 FZD3Q9NPG1 666 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 ABCB8Q9NUT2 735 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 CYP3A7-CYP3A51PA0A087WV96 503 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 PSMD10O75832 226 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 CYP3A7P24462 503 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 ENTPD1P49961 510 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 AIF1P55008 147 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 CAV3P56539 151 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 ZNF674Q2M3X9 581 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 CYP27C1Q4G0S4 372 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 UBXN11Q5T124 520 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 SH3PXD2AQ5TCZ1 1133 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 TLDC1Q6P9B6 456 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 MON1BQ7L1V2 547 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 PCDHGB1Q9Y5G3 927 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 SPATA31D1Q6ZQQ2 1576 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 OR6C74A6NCV1 312 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 A6NHS1 94 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 C1orf196B1AJZ1 125 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 SLC19A2O60779 497 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 C1RP00736 705 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 BCKDHAP12694 445 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 F8A1P23610 371 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 CCND3P30281 292 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 CRISP3P54108 245 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 DSTNP60981 165 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 IKBKEQ14164 716 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 ZNF550Q7Z398 422 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 GALNT13Q8IUC8 556 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 SHKBP1Q8TBC3 707 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 PYURFQ96I23 114 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 STRA6Q9BX79 667 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 YTHDF1Q9BYJ9 559 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 ATG5Q9H1Y0 275 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 OR51I1Q9H343 314 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 OR2S2Q9NQN1 319 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 TUBG2Q9NRH3 451 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 RHCGQ9UBD6 479 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 ERVK-19Q9WJR5 959 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 PTPRJQ12913 1337 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 A0A1W2PRB8 838 aa10.75□□□□□ -0.69
GTF3C1-201ENST00000356183 LRRN3E7EW58 273 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms