RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PLPP4Q5VZY2 271 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 BICRALQ6AI39 1079 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 SPATA19Q7Z5L4 167 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 IQCF2Q8IXL9 164 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 PGBD5Q8N414 524 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 WDR48Q8TAF3 677 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 BPIFB1Q8TDL5 484 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 AP3S1Q92572 193 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 SCAMP4Q969E2 229 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 BIRC8Q96P09 236 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 GSTO2Q9H4Y5 243 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 C8orf4Q9NR00 106 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 MLXQ9UH92 298 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 PFDN2Q9UHV9 154 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 MAGED1Q9Y5V3 778 aaPredicted RBP13.69□□□□□ -0.22
SREBF1-202ENST00000355815 ARHGEF33A8MVX0 844 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 NME4O00746 187 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 ORC5O43913 435 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 B4GALT3O60512 393 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 IL1BP01584 269 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 SLC6A4P31645 630 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 PLEKHG6Q3KR16 790 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 RBM48Q5RL73 367 aaKnown RBP13.69□□□□□ -0.22
SREBF1-202ENST00000355815 SNAP47Q5SQN1 464 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 ZNF648Q5T619 568 aaPredicted RBP13.69□□□□□ -0.22
SREBF1-202ENST00000355815 USP43Q70EL4 1123 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 NELL1Q92832 810 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 WACQ9BTA9 647 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 CSNK1G1Q9HCP0 422 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 PCDHGA7Q9Y5G6 932 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 LY75O60449 1722 aa13.69□□□□□ -0.22
SREBF1-202ENST00000355815 ESR1P03372 595 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 ATF6P18850 670 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 MATN1P21941 496 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 PRKACBP22694 351 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 CHIT1Q13231 466 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 ANKRD26P1Q6NSI1 321 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 Q6ZVU0 165 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 RD3Q7Z3Z2 195 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 CMTR2Q8IYT2 770 aaKnown RBP13.68□□□□□ -0.22
SREBF1-202ENST00000355815 KRTCAP2Q8N6L1 136 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 ZFP90Q8TF47 636 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 BRD9Q9H8M2 597 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 MBD2Q9UBB5 411 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 MAP4K5Q9Y4K4 846 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 A0A1W2PQ45 241 aaPredicted RBP13.68□□□□□ -0.22
SREBF1-202ENST00000355815 A0A1W2PQY0 241 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 GRIA2P42262 883 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 DPP6P42658 865 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 HSF2Q03933 536 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 SETMARQ53H47 684 aaPredicted RBP13.68□□□□□ -0.22
SREBF1-202ENST00000355815 NANOGP8Q6NSW7 305 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 DSG4Q86SJ6 1040 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 FAM217AQ8IXS0 508 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 BEND7Q8N7W2 519 aaPredicted RBP13.68□□□□□ -0.22
SREBF1-202ENST00000355815 SH3RF2Q8TEC5 729 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 CGREF1Q99674 301 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 TMEM106CQ9BVX2 250 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 NANOGQ9H9S0 305 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 MAPRE3Q9UPY8 281 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 SLC22A14Q9Y267 594 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 DYRK1BQ9Y463 629 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 LCHNA4D1U4 455 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 DFNA5O60443 496 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 MT-ND2P03891 347 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 CYBAP13498 195 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 ERVK-8P63133 956 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 FAM189BP81408 668 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 CCSAPQ6IQ19 270 aaPredicted RBP13.68□□□□□ -0.22
SREBF1-202ENST00000355815 IKBIPQ70UQ0 350 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 LAPTM4BQ86VI4 370 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 COLGALT2Q8IYK4 626 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 HS3ST5Q8IZT8 346 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 PACRGLQ8N7B6 248 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 CYB5D2Q8WUJ1 264 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 Q96MT0 163 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 PSKH2Q96QS6 385 aa13.68□□□□□ -0.22
SREBF1-202ENST00000355815 SPIN1Q9Y657 262 aaPredicted RBP13.68□□□□□ -0.22
SREBF1-202ENST00000355815 MID1O15344 667 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 KHDRBS3O75525 346 aaKnown RBP13.67□□□□□ -0.22
SREBF1-202ENST00000355815 APOL3O95236 402 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 GSRP00390 522 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 C1QAP02745 245 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 BUD31P41223 144 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-202ENST00000355815 UGT2B15P54855 530 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 PAGE3Q5JUK9 113 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 HID1Q8IV36 788 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 OR5K1Q8NHB7 308 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 AKAP1Q92667 903 aaKnown RBP eCLIP13.67□□□□□ -0.222e-7■■■□□ 16.5
SREBF1-202ENST00000355815 MYEOVQ96EZ4 313 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 C1orf74Q96LT6 269 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 SLC22A4Q9H015 551 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 TREX1Q9NSU2 369 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 TAS2R9Q9NYW1 312 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 TVP23BQ9NYZ1 205 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 SLCO3A1Q9UIG8 710 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 SNX6Q9UNH7 406 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 RNF6Q9Y252 685 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 M0QZQ0 153 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 PLK4O00444 970 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms