RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ARMC1Q9NVT9 282 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 SOX1O00570 391 aaPredicted RBP16.59■□□□□ 0.25
VPS13B-201ENST00000355155 KCNH1O95259 989 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 CXCR2P25025 360 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 PTPN6P29350 595 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 AKT2P31751 481 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 ARFIP1P53367 373 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 RUNDC3AQ59EK9 446 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 CATSPEREQ5SY80 951 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 KIAA0895LQ68EN5 471 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 BHLHE22Q8NFJ8 381 aaPredicted RBP16.59■□□□□ 0.25
VPS13B-201ENST00000355155 SLC26A7Q8TE54 656 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 ZFPM2Q8WW38 1151 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 TRIM15Q9C019 465 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 PAIP1Q9H074 479 aaKnown RBP16.59■□□□□ 0.25
VPS13B-201ENST00000355155 PCED1AQ9H1Q7 454 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 PCDHB3Q9Y5E6 796 aa16.59■□□□□ 0.25
VPS13B-201ENST00000355155 CDH23Q9H251 3354 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 MAGEB17A8MXT2 336 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 SEMA4FO95754 770 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 ACP5P13686 325 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 NDUFS1P28331 727 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 RAB28P51157 221 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 PHEXP78562 749 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 CLCA4Q14CN2 919 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 CCDC6Q16204 474 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 KIAA1324Q6UXG2 1013 aaKnown RBP16.58■□□□□ 0.25
VPS13B-201ENST00000355155 GPR155Q7Z3F1 870 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 VN1R5Q7Z5H4 357 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 KRT78Q8N1N4 520 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 METTL4Q8N3J2 472 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 COQ8BQ96D53 544 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 ZNF764Q96H86 408 aaPredicted RBP16.58■□□□□ 0.25
VPS13B-201ENST00000355155 TRNAU1APQ9NX07 287 aaKnown RBP16.58■□□□□ 0.25
VPS13B-201ENST00000355155 ATP6V1HQ9UI12 483 aa16.58■□□□□ 0.25
VPS13B-201ENST00000355155 POM121BA6NF01 834 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 KDM1AO60341 852 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 TBX19O60806 448 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 SCN2BO60939 215 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 ETHE1O95571 254 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 IGHV4-34P06331 123 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 MTHFD1P11586 935 aaKnown RBP16.58■□□□□ 0.24
VPS13B-201ENST00000355155 ACADSP16219 412 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 SLC7A1P30825 629 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 TIA1P31483 386 aaKnown RBP eCLIP16.58■□□□□ 0.24
VPS13B-201ENST00000355155 TRPC1P48995 793 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 PHC1P78364 1004 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 RPE65Q16518 533 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 OGFRL1Q5TC84 451 aaPredicted RBP16.58■□□□□ 0.24
VPS13B-201ENST00000355155 CHST15Q7LFX5 561 aaPredicted RBP16.58■□□□□ 0.24
VPS13B-201ENST00000355155 MSRB3Q8IXL7 192 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 PAPD5Q8NDF8 572 aaKnown RBP16.58■□□□□ 0.24
VPS13B-201ENST00000355155 OR1E3Q8WZA6 343 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 POP5Q969H6 163 aaKnown RBP16.58■□□□□ 0.24
VPS13B-201ENST00000355155 SLC45A3Q96JT2 553 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 RIMS3Q9UJD0 308 aa16.58■□□□□ 0.24
VPS13B-201ENST00000355155 COLQQ9Y215 455 aaPredicted RBP16.58■□□□□ 0.24
VPS13B-201ENST00000355155 PRAMEF26H0Y7S4 382 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 RABIFP47224 123 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 GSK3BP49841 420 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 ABATP80404 500 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 FAM174BQ3ZCQ3 159 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 SPANXN4Q5MJ08 99 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 CALHM3Q86XJ0 350 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 PROSER1Q86XN7 944 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 TICAM1Q8IUC6 712 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 PQLC1Q8N2U9 271 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 LINC01555Q8NAE3 123 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 PYDC1Q8WXC3 89 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 PHF12Q96QT6 1004 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 SH3GL1Q99961 368 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 SLC39A3Q9BRY0 314 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 FAM120CQ9NX05 1096 aaKnown RBP16.57■□□□□ 0.24
VPS13B-201ENST00000355155 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.57■□□□□ 0.24
VPS13B-201ENST00000355155 C9JVG2 144 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 MYO1DO94832 1006 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 HRH2P25021 359 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 TACR1P25103 407 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 WNT3P56703 355 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 PDE7AQ13946 482 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 LAYNQ6UX15 382 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 C17orf64Q86WR6 236 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 DHFR2Q86XF0 187 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 C12orf66Q96MD2 445 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 ALG2Q9H553 416 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 RMND5AQ9H871 391 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 CD93Q9NPY3 652 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 WSB2Q9NYS7 404 aaPredicted RBP16.57■□□□□ 0.24
VPS13B-201ENST00000355155 WNT16Q9UBV4 365 aa16.57■□□□□ 0.24
VPS13B-201ENST00000355155 TCRBV5S2A0A599 114 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 KLHL18O94889 574 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 PTX3P26022 381 aaPredicted RBP16.56■□□□□ 0.24
VPS13B-201ENST00000355155 DGKQP52824 942 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 YBX1P67809 324 aaKnown RBP16.56■□□□□ 0.24
VPS13B-201ENST00000355155 MAPKAPK3Q16644 382 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 MTX3Q5HYI7 312 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 TLDC1Q6P9B6 456 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 KRTCAP2Q8N6L1 136 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 MTERF3Q96E29 417 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 ITCHQ96J02 903 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms