RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 CRB2Q5IJ48 1285 aa7.84□□□□□ -1.16
HTT-201ENST00000355072 AGAP6Q5VW22 663 aa7.84□□□□□ -1.16
HTT-201ENST00000355072 TMEM205Q6UW68 189 aa7.84□□□□□ -1.16
HTT-201ENST00000355072 IFNL1Q8IU54 200 aa7.84□□□□□ -1.16
HTT-201ENST00000355072 FBXO22Q8NEZ5 403 aa7.84□□□□□ -1.16
HTT-201ENST00000355072 OR10H5Q8NGA6 315 aa7.84□□□□□ -1.16
HTT-201ENST00000355072 NTAN1Q96AB6 310 aa7.84□□□□□ -1.16
HTT-201ENST00000355072 C3orf49Q96BT1 292 aa7.84□□□□□ -1.16
HTT-201ENST00000355072 AGAP4Q96P64 663 aa7.84□□□□□ -1.16
HTT-201ENST00000355072 TARS2Q9BW92 718 aaKnown RBP7.84□□□□□ -1.16
HTT-201ENST00000355072 DERL2Q9GZP9 239 aa7.84□□□□□ -1.16
HTT-201ENST00000355072 SIRPGQ9P1W8 387 aa7.84□□□□□ -1.16
HTT-201ENST00000355072 HACL1Q9UJ83 578 aa7.84□□□□□ -1.16
HTT-201ENST00000355072 CIB4A0PJX0 185 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 ANKRD33BA6NCL7 494 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 SLC22A31A6NKX4 558 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 HLA-HP01893 362 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 CD86P42081 329 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 NFKB2Q00653 900 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 DUSP4Q13115 394 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 TARDBPQ13148 414 aaKnown RBP eCLIP7.83□□□□□ -1.162e-6■■■□□ 18.4
HTT-201ENST00000355072 ACSBG2Q5FVE4 666 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 SLC39A4Q6P5W5 647 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 CIR1Q86X95 450 aaPredicted RBP7.83□□□□□ -1.16
HTT-201ENST00000355072 ANKFN1Q8N957 763 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 ZNF382Q96SR6 550 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 ENY2Q9NPA8 101 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 TSPAN15O95858 294 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 MOGSQ13724 837 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 GRK1Q15835 563 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 SLC27A4Q6P1M0 643 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 RPL22L1Q6P5R6 122 aaKnown RBP7.83□□□□□ -1.16
HTT-201ENST00000355072 SOBPA7XYQ1 873 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 C1QTNF3-AMACRE9PGA6 284 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 ANKDD1AQ495B1 522 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 CXorf57Q6NSI4 855 aaKnown RBP7.83□□□□□ -1.16
HTT-201ENST00000355072 C2orf15Q8WU43 125 aaKnown RBP7.83□□□□□ -1.16
HTT-201ENST00000355072 LPGAT1Q92604 370 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 PLD4Q96BZ4 506 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 MS4A12Q9NXJ0 267 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 GPRC5BQ9NZH0 403 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 SALL3Q9BXA9 1300 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 NPIPA5A0A0B4J1W7 369 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 RGS9O75916 674 aaPredicted RBP7.83□□□□□ -1.16
HTT-201ENST00000355072 FAM163BP0C2L3 166 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 PKMP14618 531 aaKnown RBP7.83□□□□□ -1.16
HTT-201ENST00000355072 HLCSP50747 726 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 CBX2Q14781 532 aaPredicted RBP7.83□□□□□ -1.16
HTT-201ENST00000355072 AWAT2Q6E213 333 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 BRAT1Q6PJG6 821 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 GPAT4Q86UL3 456 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 RETREG3Q86VR2 466 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 FAM151AQ8WW52 585 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 AARSD1Q9BTE6 412 aaKnown RBP7.83□□□□□ -1.16
HTT-201ENST00000355072 RGS11O94810 467 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 TPPPO94811 219 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 RGS19P49795 217 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 BTBD16Q32M84 506 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 ZNF280BQ86YH2 543 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 TNFRSF25Q93038 417 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 TMED9Q9BVK6 235 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 WASH4PA8MWX3 477 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 NPC1O15118 1278 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 BACE1P56817 501 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 PPP3CAQ08209 521 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 ABHD18Q0P651 414 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 RAB31Q13636 194 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 CD300LGQ6UXG3 332 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 SYT3Q9BQG1 590 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 TFR2Q9UP52 801 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 SPTBN1Q01082 2364 aaKnown RBP7.83□□□□□ -1.16
HTT-201ENST00000355072 HYKKA2RU49 373 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 HSD17B1P14061 328 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 FBLN1P23142 703 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 ZNF34Q8IZ26 560 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 ASB8Q9H765 288 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 TMEM260Q9NX78 707 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 CD44P16070 742 aaKnown RBP7.83□□□□□ -1.16
HTT-201ENST00000355072 LHCGRP22888 699 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 HLA-FP30511 346 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 CLCN7P51798 805 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 LARP4Q71RC2 724 aaKnown RBP eCLIP7.83□□□□□ -1.16
HTT-201ENST00000355072 OTOP1Q7RTM1 612 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 OR10R2Q8NGX6 335 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 ACTRT3Q9BYD9 372 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 PREBQ9HCU5 417 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 TREM1Q9NP99 234 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 A8MXE2 369 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 PPM1BO75688 479 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 PSMB4P28070 264 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 LRRC66Q68CR7 880 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 TRIM46Q7Z4K8 759 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 SLC22A16Q86VW1 577 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 CMTM1Q8IZ96 169 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 SEMA6DQ8NFY4 1073 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 LILRB4Q8NHJ6 448 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 COPS8Q99627 209 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 OSBPL2Q9H1P3 480 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 SLC25A51Q9H1U9 297 aa7.83□□□□□ -1.16
HTT-201ENST00000355072 HCN4Q9Y3Q4 1203 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms