RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 GPR107Q5VW38 600 aa14.47□□□□□ -0.09
COL17A1-201ENST00000353479 ARFGAP1Q8N6T3 406 aa14.47□□□□□ -0.09
COL17A1-201ENST00000353479 SMPDL3BQ92485 455 aa14.47□□□□□ -0.09
COL17A1-201ENST00000353479 RNF38Q9H0F5 515 aa14.47□□□□□ -0.09
COL17A1-201ENST00000353479 PHF11Q9UIL8 331 aa14.47□□□□□ -0.09
COL17A1-201ENST00000353479 IKZF2Q9UKS7 526 aa14.47□□□□□ -0.09
COL17A1-201ENST00000353479 HCFC2Q9Y5Z7 792 aa14.47□□□□□ -0.09
COL17A1-201ENST00000353479 MYH9P35579 1960 aaKnown RBP14.47□□□□□ -0.09
COL17A1-201ENST00000353479 LRP5O75197 1615 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 DSC3Q14574 896 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 MZT2AQ6P582 158 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 THAP5Q7Z6K1 395 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 ZDHHC14Q8IZN3 488 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 ZNF334Q9HCZ1 680 aaPredicted RBP14.46□□□□□ -0.09
COL17A1-201ENST00000353479 OARD1Q9Y530 152 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 KPNA4O00629 521 aaPredicted RBP14.46□□□□□ -0.09
COL17A1-201ENST00000353479 FANCGO15287 622 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 MPC1LP0DKB6 136 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 JUNDP17535 347 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 PCDH1Q08174 1060 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 ANKRD26P1Q6NSI1 321 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 PHTF2Q8N3S3 785 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 NATD1Q8N6N6 113 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 OLFM1Q99784 485 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 GPATCH1Q9BRR8 931 aaKnown RBP14.46□□□□□ -0.09
COL17A1-201ENST00000353479 FAM192AQ9GZU8 254 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 NEK6Q9HC98 313 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 C11orf16Q9NQ32 467 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 EHD3Q9NZN3 535 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 P2RX2Q9UBL9 471 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 SERTAD3Q9UJW9 196 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 MRPS7Q9Y2R9 242 aaKnown RBP14.46□□□□□ -0.09
COL17A1-201ENST00000353479 OPN1SWP03999 348 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 FGF3P11487 239 aaPredicted RBP14.46□□□□□ -0.09
COL17A1-201ENST00000353479 RPL5P46777 297 aaKnown RBP14.46□□□□□ -0.09
COL17A1-201ENST00000353479 ATP12AP54707 1039 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 TECRLQ5HYJ1 363 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 OAFQ86UD1 273 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 TICAM1Q8IUC6 712 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 IL17FQ96PD4 163 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 SMAD6O43541 496 aaKnown RBP14.46□□□□□ -0.09
COL17A1-201ENST00000353479 MGRN1O60291 552 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 KLK3P07288 261 aaPredicted RBP14.46□□□□□ -0.09
COL17A1-201ENST00000353479 SLC35E2BP0CK96 405 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 RAP2AP10114 183 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 PEX2P28328 305 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 OC90Q02509 493 aaPredicted RBP14.46□□□□□ -0.09
COL17A1-201ENST00000353479 RAB41Q5JT25 222 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 ZHX1-C8orf76Q96EF9 292 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 SCRN2Q96FV2 425 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 MGME1Q9BQP7 344 aa14.46□□□□□ -0.09
COL17A1-201ENST00000353479 C2orf74A8MZ97 194 aa14.46□□□□□ -0.1
COL17A1-201ENST00000353479 NPC1O15118 1278 aa14.46□□□□□ -0.1
COL17A1-201ENST00000353479 TYROBPO43914 113 aa14.46□□□□□ -0.1
COL17A1-201ENST00000353479 PRMT3O60678 531 aa14.46□□□□□ -0.1
COL17A1-201ENST00000353479 TRIM71Q2Q1W2 868 aaKnown RBP14.46□□□□□ -0.1
COL17A1-201ENST00000353479 SMARCD3Q6STE5 483 aa14.46□□□□□ -0.1
COL17A1-201ENST00000353479 ZNF570Q96NI8 536 aa14.46□□□□□ -0.1
COL17A1-201ENST00000353479 SLC17A9Q9BYT1 436 aa14.46□□□□□ -0.1
COL17A1-201ENST00000353479 TBL1XR1Q9BZK7 514 aa14.46□□□□□ -0.1
COL17A1-201ENST00000353479 FBRSL1Q9HCM7 1045 aaKnown RBP14.46□□□□□ -0.1
COL17A1-201ENST00000353479 GPR34Q9UPC5 381 aa14.46□□□□□ -0.1
COL17A1-201ENST00000353479 A0A0U1RQS6 177 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 OR6C74A6NCV1 312 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 GLOD5A6NK44 160 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 BCHEP06276 602 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 MYL9P24844 172 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 EEFSECP57772 596 aaKnown RBP14.45□□□□□ -0.1
COL17A1-201ENST00000353479 SPANXN4Q5MJ08 99 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 TRAF7Q6Q0C0 670 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 FAM180AQ6UWF9 173 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 SLC30A8Q8IWU4 369 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 METTL27Q8N6F8 245 aaPredicted RBP14.45□□□□□ -0.1
COL17A1-201ENST00000353479 SYT11Q9BT88 431 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 RPRD1BQ9NQG5 326 aaKnown RBP14.45□□□□□ -0.1
COL17A1-201ENST00000353479 EME2A4GXA9 379 aaPredicted RBP14.45□□□□□ -0.1
COL17A1-201ENST00000353479 C11orf88Q6PI97 169 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 SVOPLQ8N434 492 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 AMER2Q8N7J2 671 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 APOBEC3BQ9UH17 382 aaKnown RBP14.45□□□□□ -0.1
COL17A1-201ENST00000353479 DLGAP4Q9Y2H0 992 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 IRGMA1A4Y4 181 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 NOBOXO60393 691 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 PGRP06401 933 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 AHCYP23526 432 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 GJA8P48165 433 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 CLCN4P51793 760 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 ZNF317Q96PQ6 595 aaPredicted RBP14.45□□□□□ -0.1
COL17A1-201ENST00000353479 BOCQ9BWV1 1114 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 THUMPD1Q9NXG2 353 aaKnown RBP14.45□□□□□ -0.1
COL17A1-201ENST00000353479 SSR3Q9UNL2 185 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 SPO11Q9Y5K1 396 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 SLC16A5O15375 505 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 OR5F1O95221 314 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 ATP5A1P25705 553 aaKnown RBP14.45□□□□□ -0.1
COL17A1-201ENST00000353479 OXTRP30559 389 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 GRK6P43250 576 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 SUOXP51687 545 aa14.45□□□□□ -0.1
COL17A1-201ENST00000353479 VSX2P58304 361 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms