RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 NKX3-2P78367 333 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF235Q14590 738 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 POU4F3Q15319 338 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 WSCD2Q2TBF2 565 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 SETMARQ53H47 684 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ZZZ3Q8IYH5 903 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 FBXL6Q8N531 539 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GALNT11Q8NCW6 608 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 LPCAT1Q8NF37 534 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 OR9Q1Q8NGQ5 310 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 KCTD13Q8WZ19 329 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 PSMG2Q969U7 264 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 MCCC1Q96RQ3 725 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 FEVQ99581 238 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 DPH2Q9BQC3 489 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 AIFM2Q9BRQ8 373 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 NXF2Q9GZY0 626 aaKnown RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 LRTM1Q9HBL6 345 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 BPIFA1Q9NP55 256 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 MCUBQ9NWR8 336 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 SLC23A1Q9UHI7 598 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 SIP14410 1827 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 CIB4A0PJX0 185 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 FAM220BPB1ANY3 271 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 STX16O14662 325 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 LDB2O43679 373 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GPX5O75715 221 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 EGFRP00533 1210 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 C9P02748 559 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 PSMA1P25786 263 aaKnown RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ETV3P41162 512 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 RPL34P49207 117 aaKnown RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 CDKN1CP49918 316 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 STC1P52823 247 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 SOX4Q06945 474 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 SUZ12Q15022 739 aaKnown RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GPR19Q15760 415 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 CPSF6Q16630 551 aaKnown RBP eCLIP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 USP39Q53GS9 565 aaKnown RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 LCN1P1Q5VSP4 162 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ATG9BQ674R7 924 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF57Q68EA5 555 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 PM20D1Q6GTS8 502 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GOLGA7Q7Z5G4 137 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ADAMTSL2Q86TH1 951 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 RASAL3Q86YV0 1011 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 OR4K2Q8NGD2 314 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GTPBP3Q969Y2 492 aaKnown RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 HMCESQ96FZ2 354 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF382Q96SR6 550 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 RNF39Q9H2S5 420 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 EVA1BQ9NVM1 165 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 WWOXQ9NZC7 414 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF222Q9UK12 451 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GJD2Q9UKL4 321 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 NUP50Q9UKX7 468 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GABRQQ9UN88 632 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ALG5Q9Y673 324 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GRXCR2A6NFK2 248 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 TNFRSF11BO00300 401 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 E2F3O00716 465 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 MUSKO15146 869 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 NBNO60934 754 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 OTCP00480 354 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 TRAPPC2P0DI81 140 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 TRAPPC2BP0DI82 140 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 MLLT3P42568 568 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-201ENST00000352993 KIR2DL3P43628 341 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 BRCC3P46736 316 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 KCNQ1P51787 676 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 HK3P52790 923 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 TIAL1Q01085 375 aaKnown RBP eCLIP7.4□□□□□ -1.22
BRCA1-201ENST00000352993 MAD2L1Q13257 205 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-201ENST00000352993 MAB21L1Q13394 359 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 FLYWCH1Q4VC44 716 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 PIK3R6Q5UE93 754 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 NOTUMQ6P988 496 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 SAMD7Q7Z3H4 446 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 VN1R5Q7Z5H4 357 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 GALNT7Q86SF2 657 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 SLC37A3Q8NCC5 494 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 IMP4Q96G21 291 aaKnown RBP7.4□□□□□ -1.22
BRCA1-201ENST00000352993 CRELD1Q96HD1 420 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 CDKN2AIPNLQ96HQ2 116 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 PANX1Q96RD7 426 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 CCM2Q9BSQ5 444 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 AP3M1Q9Y2T2 418 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 KCNE2Q9Y6J6 123 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 A0A1W2PQL4 384 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-201ENST00000352993 MOXD2PA6NHM9 499 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 FADS2P1A8MWK0 482 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 HAS3O00219 553 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 WWP2O00308 870 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 PIRO00625 290 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 FGF10O15520 208 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-201ENST00000352993 GSTM1P09488 218 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF250P15622 560 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 DDCP20711 480 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 IGFBP6P24592 240 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-201ENST00000352993 CASP9P55211 416 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms