RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ACSM4P0C7M7 580 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 FPR1P21462 350 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 F8A1P23610 371 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 APEX1P27695 318 aaKnown RBP12.86□□□□□ -0.35
IFT88-202ENST00000351808 NUP62P37198 522 aaPredicted RBP12.86□□□□□ -0.35
IFT88-202ENST00000351808 CAP2P40123 477 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 DMC1Q14565 340 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 FCN2Q15485 313 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 KIAA0930Q6ICG6 404 aaPredicted RBP12.86□□□□□ -0.35
IFT88-202ENST00000351808 C19orf48Q6RUI8 117 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 PDZD4Q76G19 769 aaPredicted RBP12.86□□□□□ -0.35
IFT88-202ENST00000351808 GALNT10Q86SR1 603 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 DENND1CQ8IV53 801 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 MSRB3Q8IXL7 192 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 C19orf18Q8NEA5 215 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 ATP6V1C2Q8NEY4 427 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 HRASLS5Q96KN8 279 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 GHITMQ9H3K2 345 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 CDCP1Q9H5V8 836 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 FKBP7Q9Y680 259 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 KCNMB2Q9Y691 235 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 GRXCR2A6NFK2 248 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 PRSS44E7EML9 344 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 M0R129 80 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 PER2O15055 1255 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 OR5F1O95221 314 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 CYP17A1P05093 508 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 ZP3P21754 424 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 CLDN20P56880 219 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 ZNF284Q2VY69 593 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 LRRC66Q68CR7 880 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 TFAP2EQ6VUC0 442 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 Q6ZSR9 355 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 ZSWIM9Q86XI8 627 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 RASGRP3Q8IV61 690 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 PM20D2Q8IYS1 436 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 SLC34A3Q8N130 599 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 AGBL3Q8NEM8 1001 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 ASB12Q8WXK4 309 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 ESAMQ96AP7 390 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 RADILQ96JH8 1075 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 RBP7Q96R05 134 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 SORBS1Q9BX66 1292 aaKnown RBP12.86□□□□□ -0.35
IFT88-202ENST00000351808 TDRD3Q9H7E2 651 aaKnown RBP12.86□□□□□ -0.35
IFT88-202ENST00000351808 ZFP64Q9NPA5 681 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 SPATA6Q9NWH7 488 aaPredicted RBP12.86□□□□□ -0.35
IFT88-202ENST00000351808 PIPSLA2A3N6 862 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 SUPT3HB4E1H0 165 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 PROM1O43490 865 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 ORC5O43913 435 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 TSPAN12O95859 305 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 PTPRAP18433 802 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 RAB3AP20336 220 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 SMSP52788 366 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 ABATP80404 500 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 C2orf80Q0P641 193 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 PTPRCAPQ14761 206 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 COL28A1Q2UY09 1125 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 FAM124AQ86V42 546 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 ZDHHC17Q8IUH5 632 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 RNF149Q8NC42 400 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 DUSP18Q8NEJ0 188 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 OR52E4Q8NGH9 312 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 CRELD1Q96HD1 420 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 CCM2Q9BSQ5 444 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 CLEC4MQ9H2X3 399 aaPredicted RBP12.85□□□□□ -0.35
IFT88-202ENST00000351808 MAPRE3Q9UPY8 281 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 KLF2Q9Y5W3 355 aaPredicted RBP12.85□□□□□ -0.35
IFT88-202ENST00000351808 AHDC1Q5TGY3 1603 aaPredicted RBP12.85□□□□□ -0.35
IFT88-202ENST00000351808 SMIM30A4D0T7 59 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 NCF1BA6NI72 391 aaPredicted RBP12.85□□□□□ -0.35
IFT88-202ENST00000351808 NCF1CA8MVU1 366 aaPredicted RBP12.85□□□□□ -0.35
IFT88-202ENST00000351808 INMT-MINDY4F8WBC2 141 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 HCRTO43612 131 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 WISP3O95389 354 aaPredicted RBP12.85□□□□□ -0.35
IFT88-202ENST00000351808 NCF1P14598 390 aaPredicted RBP12.85□□□□□ -0.35
IFT88-202ENST00000351808 ADORA2BP29275 332 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 MATKP42679 507 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 MAGEA2P43356 314 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 SCRN3Q0VDG4 424 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 ANKS6Q68DC2 871 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 MPZL3Q6UWV2 235 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 ZNF367Q7RTV3 350 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 VSIG10LQ86VR7 867 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 SLC13A3Q8WWT9 602 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 NXPE3Q969Y0 559 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 PPP1R2P1Q96PQ5 205 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 CUEDC1Q9NWM3 386 aaPredicted RBP12.85□□□□□ -0.35
IFT88-202ENST00000351808 KCMF1Q9P0J7 381 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 REV1Q9UBZ9 1251 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 MALT1Q9UDY8 824 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 SRRDQ9UH36 339 aa12.85□□□□□ -0.35
IFT88-202ENST00000351808 M0QYT0 321 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 NCAM2O15394 837 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 GMDSO60547 372 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 CELF2O95319 508 aaKnown RBP12.84□□□□□ -0.35
IFT88-202ENST00000351808 IFNA14P01570 189 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 FAM157BP0CG42 384 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 BMP8BP34820 402 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 SOX3P41225 446 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms