RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 MYBPC3Q14896 1274 aa15.58■□□□□ 0.08
PTPN11-201ENST00000351677 MEP1AQ16819 746 aa15.58■□□□□ 0.08
PTPN11-201ENST00000351677 KCNJ9Q92806 393 aa15.58■□□□□ 0.08
PTPN11-201ENST00000351677 TPT1P8Q9HAU6 139 aa15.58■□□□□ 0.08
PTPN11-201ENST00000351677 B4GALT6Q9UBX8 382 aa15.58■□□□□ 0.08
PTPN11-201ENST00000351677 TLR4O00206 839 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 LEFTY2O00292 366 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 SDHDO14521 159 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 AHCYP23526 432 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 PRMT2P55345 433 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 GPM6BQ13491 265 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 GRB7Q14451 532 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 EIPR1Q53HC9 387 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 TECRLQ5HYJ1 363 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 SMYD5Q6GMV2 418 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 ATCAYQ86WG3 371 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 TTLQ8NG68 377 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 GRHL3Q8TE85 626 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 ZNF778Q96MU6 729 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 ZNF641Q96N77 438 aaPredicted RBP15.57■□□□□ 0.08
PTPN11-201ENST00000351677 SEZ6LQ9BYH1 1024 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 LIN28AQ9H9Z2 209 aaKnown RBP15.57■□□□□ 0.08
PTPN11-201ENST00000351677 SMURF2Q9HAU4 748 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 MOCS1Q9NZB8 636 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 SCN11AQ9UI33 1791 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 A0A0J9YVX5 310 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 FAM172BPA6NC97 362 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 MAFKO60675 156 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 RB1P06400 928 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 FESP07332 822 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 GRK6P43250 576 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 CEACAM20Q6UY09 585 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 GRASPQ7Z6J2 395 aaPredicted RBP15.57■□□□□ 0.08
PTPN11-201ENST00000351677 PIK3R3Q92569 461 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 TMEM203Q969S6 136 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 PRR11Q96HE9 360 aaPredicted RBP15.57■□□□□ 0.08
PTPN11-201ENST00000351677 UTS2RQ9UKP6 389 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 SLC35E2BP0CK96 405 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 HLA-EP13747 358 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 BTN3A2P78410 334 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 OR6K6Q8NGW6 343 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 TFGQ92734 400 aaPredicted RBP15.57■□□□□ 0.08
PTPN11-201ENST00000351677 GAL3ST1Q99999 423 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 LRRC42Q9Y546 428 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 CD1DP15813 335 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 ZNF30P17039 623 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 FSHRP23945 695 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 EDNRBP24530 442 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 IVDP26440 423 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 LEPRP48357 1165 aaKnown RBP15.57■□□□□ 0.08
PTPN11-201ENST00000351677 SAMD14Q8IZD0 417 aaPredicted RBP15.57■□□□□ 0.08
PTPN11-201ENST00000351677 CRYGNQ8WXF5 182 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 IFNA6P05013 189 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 DNASE1L1P49184 302 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 RORCP51449 518 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 TRIM74Q86UV6 250 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 C5P01031 1676 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 C10orf71Q711Q0 1435 aa15.57■□□□□ 0.08
PTPN11-201ENST00000351677 EPOP01588 193 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 ZNF12P17014 697 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 CSTF2P33240 577 aaKnown RBP eCLIP15.56■□□□□ 0.08
PTPN11-201ENST00000351677 ALDH3A2P51648 485 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 CHST4Q8NCG5 386 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 STRA6Q9BX79 667 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 MED28Q9H204 178 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 POFUT2Q9Y2G5 429 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 INSL6Q9Y581 213 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 PRAMEF12O95522 483 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 C6orf47O95873 294 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 H1F0P07305 194 aaKnown RBP15.56■□□□□ 0.08
PTPN11-201ENST00000351677 ENDOVQ8N8Q3 282 aaKnown RBP15.56■□□□□ 0.08
PTPN11-201ENST00000351677 GPR62Q9BZJ7 368 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 TOR3AQ9H497 397 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 LTBP3Q9NS15 1303 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 NOVP48745 357 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 LY6G5CQ5SRR4 150 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 PPP2R2DQ66LE6 453 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 ZFP3Q96NJ6 502 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 IL12RB2Q99665 862 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 GPN1Q9HCN4 374 aaPredicted RBP15.56■□□□□ 0.08
PTPN11-201ENST00000351677 MARCH4Q9P2E8 410 aaPredicted RBP15.56■□□□□ 0.08
PTPN11-201ENST00000351677 RBM7Q9Y580 266 aaKnown RBP15.56■□□□□ 0.08
PTPN11-201ENST00000351677 CCDC85CA6NKD9 419 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 SLC22A1O15245 554 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 GALTP07902 379 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 MEF2AQ02078 507 aaPredicted RBP15.56■□□□□ 0.08
PTPN11-201ENST00000351677 FPGSQ05932 587 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 C6orf136Q5SQH8 315 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 PRR23BQ6ZRT6 265 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 Q6ZVL8 140 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 NANOGNBQ7Z5D8 188 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 CELF5Q8N6W0 485 aaKnown RBP15.56■□□□□ 0.08
PTPN11-201ENST00000351677 DMRTB1Q96MA1 342 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 CITED4Q96RK1 184 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 C11orf49Q9H6J7 331 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 RPF2Q9H7B2 306 aaKnown RBP15.56■□□□□ 0.08
PTPN11-201ENST00000351677 THUMPD1Q9NXG2 353 aaKnown RBP15.56■□□□□ 0.08
PTPN11-201ENST00000351677 TAS2R7Q9NYW3 318 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 KCNK6Q9Y257 313 aa15.56■□□□□ 0.08
PTPN11-201ENST00000351677 CDKN2DP55273 166 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms