RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 APOLD1Q96LR9 279 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 LRGUKQ96M69 825 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 PPM1MQ96MI6 270 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 ZNF583Q96ND8 569 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 TSSK3Q96PN8 268 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 OR52E6Q96RD3 313 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 NR1H4Q96RI1 486 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 KCTD14Q9BQ13 255 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 CPPED1Q9BRF8 314 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 HAUS8Q9BT25 410 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 EFHD1Q9BUP0 239 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 SLC17A9Q9BYT1 436 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 TRIM8Q9BZR9 551 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 BTBD1Q9H0C5 482 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 RPF2Q9H7B2 306 aaKnown RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 WDR26Q9H7D7 661 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 SGK2Q9HBY8 427 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 BATF3Q9NR55 127 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 PHPT1Q9NRX4 125 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 GEMIN8Q9NWZ8 242 aaKnown RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 SPATA7Q9P0W8 599 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 CIDEBQ9UHD4 219 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 CD207Q9UJ71 328 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 ACSL5Q9ULC5 683 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 ASF1AQ9Y294 204 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 DYRK1BQ9Y463 629 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 PRKAB1Q9Y478 270 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 DTNAQ9Y4J8 743 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 GMEB1Q9Y692 573 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 A0A1W2PPV9 198 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 KANSL1LA0AUZ9 987 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 DHRS12A0PJE2 317 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 PIPSLA2A3N6 862 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 C2CD4DB7Z1M9 353 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 HNRNPRO43390 633 aaKnown RBP6.67□□□□□ -1.34
TRIM55-203ENST00000350034 DENRO43583 198 aaKnown RBP6.67□□□□□ -1.34
TRIM55-203ENST00000350034 GPR37L1O60883 481 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 KLHL18O94889 574 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 DNTTP04053 509 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 RPN2P04844 631 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 HOXB2P14652 356 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 UQCRBP14927 111 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 GLULP15104 373 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 GGT1P19440 569 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 GRIA3P42263 894 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 PIK3CBP42338 1070 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 TRPC1P48995 793 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 MTPNP58546 118 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 KIAA1024LP59773 190 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 SRSF11Q05519 484 aaKnown RBP6.67□□□□□ -1.34
TRIM55-203ENST00000350034 CYP4F3Q08477 520 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 ACSM2AQ08AH3 577 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 GRSF1Q12849 480 aaKnown RBP eCLIP6.67□□□□□ -1.34
TRIM55-203ENST00000350034 SGCGQ13326 291 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 SLBPQ14493 270 aaKnown RBP eCLIP6.67□□□□□ -1.34
TRIM55-203ENST00000350034 PON2Q15165 354 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 UGT8Q16880 541 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 LRRC36Q1X8D7 754 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 GTDC1Q4AE62 458 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 AASDHQ4L235 1098 aaPredicted RBP6.67□□□□□ -1.34
TRIM55-203ENST00000350034 PYCR3Q53H96 274 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 SPIN4Q56A73 249 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 PAGE2BQ5JRK9 111 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 PRAMEF14Q5SWL7 426 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 PRAMEF13Q5VWM6 474 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 ACSM2BQ68CK6 577 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 ADNP2Q6IQ32 1131 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 GPR155Q7Z3F1 870 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 VN1R5Q7Z5H4 357 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 TMPRSS11BQ86T26 416 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 CACUL1Q86Y37 369 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 SPPL2CQ8IUH8 684 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 TBC1D21Q8IYX1 336 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 SLC44A3Q8N4M1 653 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 DTWD1Q8N5C7 304 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 LMNTD1Q8N9Z9 388 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 PHC3Q8NDX5 983 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 ZNF548Q8NEK5 533 aaPredicted RBP6.67□□□□□ -1.34
TRIM55-203ENST00000350034 TRPV3Q8NET8 790 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 ABHD11Q8NFV4 315 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 OR8J2Q8NGG1 315 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 OR14C36Q8NHC7 312 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 CLHC1Q8NHS4 586 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 LRTOMTQ8WZ04 291 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 STARD8Q92502 1023 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 UBE2E3Q969T4 207 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 COQ8BQ96D53 544 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 ITCHQ96J02 903 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 EGLN2Q96KS0 407 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 IL17FQ96PD4 163 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 PHF12Q96QT6 1004 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 MTERF1Q99551 399 aaKnown RBP6.67□□□□□ -1.34
TRIM55-203ENST00000350034 SH3GL1Q99961 368 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 INPP5KQ9BT40 448 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 APOOQ9BUR5 198 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 C1QTNF7Q9BXJ2 289 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 OSBPL6Q9BZF3 934 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 SLC6A17Q9H1V8 727 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 SPNS1Q9H2V7 528 aa6.67□□□□□ -1.34
TRIM55-203ENST00000350034 RHBGQ9H310 441 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms