RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PNPLA3Q9NST1 481 aa16.13■□□□□ 0.17
SAMM50-201ENST00000350028 SIRT5Q9NXA8 310 aa16.13■□□□□ 0.17
SAMM50-201ENST00000350028 LIMD1Q9UGP4 676 aa16.13■□□□□ 0.17
SAMM50-201ENST00000350028 V9GYQ6 96 aa16.13■□□□□ 0.17
SAMM50-201ENST00000350028 EVPLLA8MZ36 301 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 FOXE1O00358 373 aaPredicted RBP16.12■□□□□ 0.17
SAMM50-201ENST00000350028 DLGAP1O14490 977 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 PI15O43692 258 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 CLPTM1O96005 669 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 GSNP06396 782 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 PABPC4LP0CB38 370 aaKnown RBP16.12■□□□□ 0.17
SAMM50-201ENST00000350028 COX7A2P14406 83 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 IL1RNP18510 177 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 BMP8BP34820 402 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 DRD3P35462 400 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 TAP2Q03519 686 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 MERTKQ12866 999 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 ITPRIPL2Q3MIP1 535 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 PPP2R2DQ66LE6 453 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 KRT80Q6KB66 452 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 AMZ2Q86W34 360 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 LAS2Q8IYD9 372 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 C1orf52Q8N6N3 182 aaKnown RBP16.12■□□□□ 0.17
SAMM50-201ENST00000350028 OR7A2PQ8NGA2 310 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 GFM2Q969S9 779 aaKnown RBP16.12■□□□□ 0.17
SAMM50-201ENST00000350028 RAD51AP1Q96B01 352 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 REXO5Q96IC2 774 aaKnown RBP16.12■□□□□ 0.17
SAMM50-201ENST00000350028 VPS50Q96JG6 964 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 EPB41L1Q9H4G0 881 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 ZDHHC4Q9NPG8 344 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 OLAHQ9NV23 265 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 MSRAQ9UJ68 235 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 TMEM98Q9Y2Y6 226 aa16.12■□□□□ 0.17
SAMM50-201ENST00000350028 SMIM31A0A1B0GVY4 71 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 IGLON5A6NGN9 336 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 FPGTO14772 594 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 SCN2BO60939 215 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 CREG1O75629 220 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 ADH1BP00325 375 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 ANXA4P09525 319 aaPredicted RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 KELP23276 732 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 CDKN2CP42773 168 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 WNT3P56703 355 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 RPS13P62277 151 aaKnown RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 RAE1P78406 368 aaKnown RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 CAMK2GQ13555 558 aaPredicted RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 AGERQ15109 404 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 CST6Q15828 149 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 FAM83HQ6ZRV2 1179 aaPredicted RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 PDZD3Q86UT5 571 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 LRRTM4Q86VH4 590 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 HEATR4Q86WZ0 1026 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 SLC5A11Q8WWX8 675 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 MRPL38Q96DV4 380 aaKnown RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 CHFRQ96EP1 664 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 MYADMQ96S97 322 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 PRPF18Q99633 342 aaKnown RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 ADI1Q9BV57 179 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 MAGIXQ9H6Y5 334 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 PRM3Q9NNZ6 103 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 CD320Q9NPF0 282 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 CCDC177Q9NQR7 707 aaPredicted RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 DCAF13Q9NV06 445 aaKnown RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 ANTXRLA6NF34 631 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 EI24O14681 340 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 MID1O15344 667 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 PCDH8O95206 1070 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 ETHE1O95571 254 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 PCCBP05166 539 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 ZNF23P17027 643 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 C5AR1P21730 350 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 MYF6P23409 242 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 TEAD1P28347 426 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 GDI1P31150 447 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 TIA1P31483 386 aaKnown RBP eCLIP16.11■□□□□ 0.173e-6■■□□□ 12.2
SAMM50-201ENST00000350028 RPS9P46781 194 aaKnown RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 CDK3Q00526 305 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 TSTA3Q13630 321 aaPredicted RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 SLBPQ14493 270 aaKnown RBP eCLIP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 WSCD2Q2TBF2 565 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 SLC36A3Q495N2 470 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 ATAT1Q5SQI0 421 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 CATSPEREQ5SY80 951 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 DOK6Q6PKX4 331 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 NXPE4Q6UWF7 544 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 LCTLQ6UWM7 567 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 CAMKMTQ7Z624 323 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 SERPINA11Q86U17 422 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 FBXO30Q8TB52 745 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 UBE2E3Q969T4 207 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 SLC47A1Q96FL8 570 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 AURKBQ96GD4 344 aaPredicted RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 PANX1Q96RD7 426 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 KXD1Q9BQD3 176 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 SMPD3Q9NY59 655 aaPredicted RBP16.11■□□□□ 0.17
SAMM50-201ENST00000350028 ASF1AQ9Y294 204 aa16.11■□□□□ 0.17
SAMM50-201ENST00000350028 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.1■□□□□ 0.17
SAMM50-201ENST00000350028 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.1■□□□□ 0.17
SAMM50-201ENST00000350028 KLHL33A6NCF5 533 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms