RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SLC16A13Q7RTY0 426 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 KIAA0907Q7Z7F0 614 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 PHYKPLQ8IUZ5 450 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 TTC29Q8NA56 475 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 FCGR1BQ92637 280 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 RHBDF1Q96CC6 855 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 ZBTB18Q99592 522 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 HTATIP2Q9BUP3 242 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 RHOJQ9H4E5 214 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 STARD7Q9NQZ5 370 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 ANKEF1Q9NU02 776 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 MAP3K20Q9NYL2 800 aaKnown RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 CTSFQ9UBX1 484 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 NDRG2Q9UN36 371 aaKnown RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 LOXHD1Q8IVV2 1947 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 FABP12A6NFH5 140 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 POM121CA8CG34 1229 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 INPPL1O15357 1258 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 VIPP01282 170 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 PSAPP07602 524 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 ERCC2P18074 760 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 GGT1P19440 569 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 RECQLP46063 649 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 ATXN1P54253 815 aaKnown RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 TAS2R39P59534 338 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 SH3BP2P78314 561 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 PSPHP78330 225 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 TSTQ16762 297 aaKnown RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 LGALSLQ3ZCW2 172 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 SUPT20HL1Q3ZLR7 823 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 SPATS1Q496A3 300 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 ARHGAP17Q68EM7 881 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 DBX2Q6ZNG2 339 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 ADGRD2Q7Z7M1 963 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 ADHFE1Q8IWW8 467 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 PNPLA1Q8N8W4 532 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 DCBLD1Q8N8Z6 715 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 ATAD1Q8NBU5 361 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 IPCEF1Q8WWN9 437 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 ZBED6CLQ96FA7 236 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 PELOQ9BRX2 385 aaKnown RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 TTPALQ9BTX7 342 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 TMEM245Q9H330 911 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 ZDHHC4Q9NPG8 344 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 GPR83Q9NYM4 423 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 SMIM30A4D0T7 59 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 SH3D21A4FU49 640 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 GSTA4O15217 222 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 TBCEQ15813 527 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 SNAPC1Q16533 368 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 PAN2Q504Q3 1202 aaKnown RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 SPOUT1Q5T280 376 aaKnown RBP10.35□□□□□ -0.75
CAPN3-203ENST00000349748 TAS1R3Q7RTX0 852 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 ZZZ3Q8IYH5 903 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 TWIST2Q8WVJ9 160 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 EXT2Q93063 718 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 MTERF3Q96E29 417 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 DIRAS2Q96HU8 199 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 RIT2Q99578 217 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 MSTO1Q9BUK6 570 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 ASPNQ9BXN1 380 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 HAPLN2Q9GZV7 340 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 TUBB1Q9H4B7 451 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 PDLIM7Q9NR12 457 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 MALT1Q9UDY8 824 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 MLXQ9UH92 298 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 FBXL2Q9UKC9 423 aa10.35□□□□□ -0.75
CAPN3-203ENST00000349748 FAM95CA0A1B0GW59 222 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 LRRC14BA6NHZ5 514 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 MUSKO15146 869 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 HRO43593 1189 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 CHP2O43745 196 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 SEC22BO75396 215 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 MATN4O95460 622 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 APOC3P02656 99 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 ZNF3P17036 446 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 ZFP36L2P47974 494 aaKnown RBP10.34□□□□□ -0.75
CAPN3-203ENST00000349748 RCAN2Q14206 197 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 RFX4Q33E94 735 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 CDKL4Q5MAI5 379 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 C5orf46Q6UWT4 87 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 SLC26A9Q7LBE3 791 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 KANSL1Q7Z3B3 1105 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 MYLPFQ96A32 169 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 P2RY11Q96G91 374 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 OR5M11Q96RB7 305 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 ACTR6Q9GZN1 396 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 POLG2Q9UHN1 485 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 NDRG4Q9ULP0 352 aaKnown RBP10.34□□□□□ -0.75
CAPN3-203ENST00000349748 COL1A2P08123 1366 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 C2CD4BA6NLJ0 364 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 KCNK1O00180 336 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 DIRAS1O95057 198 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 F9P00740 461 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 HAPLN1P10915 354 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-203ENST00000349748 ADRA1BP35368 520 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 CRYZQ08257 329 aaKnown RBP10.34□□□□□ -0.75
CAPN3-203ENST00000349748 ELP6Q0PNE2 266 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 GTF2H3Q13889 308 aa10.34□□□□□ -0.75
CAPN3-203ENST00000349748 KEAP1Q14145 624 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms