RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ABCD2Q9UBJ2 740 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 ZNF232Q9UNY5 417 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 PCDHGA4Q9Y5G9 962 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 A0A087WXM4 84 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 A0A1W2PP55 124 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 FPGTO14772 594 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 OPN1SWP03999 348 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 PRNPP04156 253 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 LAMP1P11279 417 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 ADRB3P13945 408 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 ZNF30P17039 623 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 CD247P20963 164 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 KIR3DL1P43629 444 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 EIF2B2P49770 351 aaKnown RBP13.45□□□□□ -0.26
TRIM4-201ENST00000349062 TMTC4Q5T4D3 741 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 HACD2Q6Y1H2 254 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 HEATR4Q86WZ0 1026 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 LSRQ86X29 649 aaPredicted RBP13.45□□□□□ -0.26
TRIM4-201ENST00000349062 TRAM1L1Q8N609 369 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 TMBIM1Q969X1 311 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 OR4K3Q96R72 315 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 ING2Q9H160 280 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 C5AR2Q9P296 337 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 CCL27Q9Y4X3 112 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 SNX8Q9Y5X2 465 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 IRAK3Q9Y616 596 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 ELOVL7A1L3X0 281 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 CXCR6O00574 342 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 ANKRD28O15084 1053 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 NFATC1O95644 943 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 ENO2P09104 434 aaPredicted RBP13.44□□□□□ -0.26
TRIM4-201ENST00000349062 ZNF8P17098 575 aaPredicted RBP13.44□□□□□ -0.26
TRIM4-201ENST00000349062 TBPL1P62380 186 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 SLBPQ14493 270 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRIM4-201ENST00000349062 KRT33BQ14525 404 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 FLCNQ8NFG4 579 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 BPIFB6Q8NFQ5 453 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 HUS1BQ8NHY5 278 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 NETO1Q8TDF5 533 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 CENPNQ96H22 339 aaPredicted RBP13.44□□□□□ -0.26
TRIM4-201ENST00000349062 ADI1Q9BV57 179 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 NTMT1Q9BV86 223 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 FAIMQ9NVQ4 179 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 ACSL6Q9UKU0 697 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 BTBD3Q9Y2F9 522 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 YBX2Q9Y2T7 364 aaKnown RBP13.44□□□□□ -0.26
TRIM4-201ENST00000349062 HS6ST1O60243 411 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 NUAK1O60285 661 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 DDX6P26196 483 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■■■■□ 26
TRIM4-201ENST00000349062 PSMB5P28074 263 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 ILF2Q12905 390 aaKnown RBP13.44□□□□□ -0.26
TRIM4-201ENST00000349062 MAD2L1Q13257 205 aaPredicted RBP13.44□□□□□ -0.26
TRIM4-201ENST00000349062 PMS2P3Q13401 168 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 FAM98BQ52LJ0 330 aaKnown RBP13.44□□□□□ -0.26
TRIM4-201ENST00000349062 USP39Q53GS9 565 aaKnown RBP13.44□□□□□ -0.26
TRIM4-201ENST00000349062 C8orf82Q6P1X6 216 aaPredicted RBP13.44□□□□□ -0.26
TRIM4-201ENST00000349062 MMP21Q8N119 569 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 SMARCD2Q92925 531 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 SDCCAG3Q96C92 435 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 MAGED4Q96JG8 741 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 NKX2-4Q9H2Z4 354 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 VPS29Q9UBQ0 182 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 TRPS1Q9UHF7 1281 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 KCNK6Q9Y257 313 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 FADS3Q9Y5Q0 445 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 KCNE2Q9Y6J6 123 aa13.44□□□□□ -0.26
TRIM4-201ENST00000349062 AQP12BA6NM10 295 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 NUDT7P0C024 238 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 CISD3P0C7P0 127 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 ACP5P13686 325 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 IMPA1P29218 277 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 DGKEP52429 567 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 PIGFQ07326 219 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 CD300CQ08708 224 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 NR1D2Q14995 579 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 C9orf64Q5T6V5 341 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 LCN8Q6JVE9 175 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 TICAM1Q8IUC6 712 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 AQP12AQ8IXF9 295 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 ZNF480Q8WV37 535 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 PLA2G2FQ9BZM2 168 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 CCDC90BQ9GZT6 254 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 IMP3Q9NV31 184 aaKnown RBP13.43□□□□□ -0.26
TRIM4-201ENST00000349062 TSC22D4Q9Y3Q8 395 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 EVPLLA8MZ36 301 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 MAN1A2O60476 641 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 MYO1DO94832 1006 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 TNFRSF1BP20333 461 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 CARTPTQ16568 116 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 NKG7Q16617 165 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 PPP2R2DQ66LE6 453 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 FAM83HQ6ZRV2 1179 aaPredicted RBP13.43□□□□□ -0.26
TRIM4-201ENST00000349062 VTCN1Q7Z7D3 282 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 SLC47A1Q96FL8 570 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 COX4I2Q96KJ9 171 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 ASB16Q96NS5 453 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 YIPF2Q9BWQ6 316 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 SPNS1Q9H2V7 528 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 SERGEFQ9UGK8 458 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 LAMA1P25391 3075 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms