RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 CSNK1A1LQ8N752 337 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 Q8NA96 180 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 ANP32BQ92688 251 aaKnown RBP12.67□□□□□ -0.38
CLCC1-202ENST00000348264 LINGO1Q96FE5 620 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 CABS1Q96KC9 395 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 RUNDC3BQ96NL0 473 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 OR2A5Q96R48 311 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 TRIM31Q9BZY9 425 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 ZNF304Q9HCX3 659 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 TAS2R13Q9NYV9 303 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 NXT1Q9UKK6 140 aaKnown RBP12.67□□□□□ -0.38
CLCC1-202ENST00000348264 SH2B3Q9UQQ2 575 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 PDE10AQ9Y233 779 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 TEX264Q9Y6I9 313 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 ICE1Q9Y2F5 2266 aa12.67□□□□□ -0.38
CLCC1-202ENST00000348264 CCDC188H7C350 402 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 FFAR3O14843 346 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 GPR42O15529 346 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 IGHEP01854 428 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 STATHP02808 62 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 FBLP22087 321 aaKnown RBP12.66□□□□□ -0.38
CLCC1-202ENST00000348264 RGS4P49798 205 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 SNRPNP63162 240 aaKnown RBP12.66□□□□□ -0.38
CLCC1-202ENST00000348264 ABATP80404 500 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 KLC1Q07866 573 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 SP140Q13342 867 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 FASTKD3Q14CZ7 662 aaKnown RBP12.66□□□□□ -0.38
CLCC1-202ENST00000348264 PHKG1Q16816 387 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 PRAMEF13Q5VWM6 474 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 LRRC8EQ6NSJ5 796 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 UGT3A1Q6NUS8 523 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 PRMT9Q6P2P2 845 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 KIRREL2Q6UWL6 708 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 PRSS58Q8IYP2 241 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 MYO1HQ8N1T3 1032 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 GPATCH11Q8N954 259 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 GABPB2Q8TAK5 448 aaPredicted RBP12.66□□□□□ -0.38
CLCC1-202ENST00000348264 CPT1CQ8TCG5 803 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 STT3BQ8TCJ2 826 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 COL26A1Q96A83 441 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 SNF8Q96H20 258 aa12.66□□□□□ -0.38
CLCC1-202ENST00000348264 ZNF552Q9H707 407 aaPredicted RBP12.66□□□□□ -0.38
CLCC1-202ENST00000348264 PPANQ9NQ55 473 aaKnown RBP12.66□□□□□ -0.38
CLCC1-202ENST00000348264 CCDC177Q9NQR7 707 aaPredicted RBP12.66□□□□□ -0.38
CLCC1-202ENST00000348264 IGLV3-12A0A075B6K2 115 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 CLEC18AA5D8T8 446 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 H7BY64 318 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 C8GP07360 202 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 ZGLP1P0C6A0 271 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 FDXRP22570 491 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 RPL21P46778 160 aaKnown RBP12.65□□□□□ -0.38
CLCC1-202ENST00000348264 UQCRFS1P47985 274 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 EMP3P54852 163 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 ARL4CP56559 192 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 SOX8P57073 446 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 MRPS25P82663 173 aaKnown RBP12.65□□□□□ -0.38
CLCC1-202ENST00000348264 RELAQ04206 551 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 SRSF1Q07955 248 aaKnown RBP eCLIP12.65□□□□□ -0.382e-6■□□□□ 8.5
CLCC1-202ENST00000348264 DSG2Q14126 1118 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 RBBP7Q16576 425 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 VWA2Q5GFL6 755 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 HECTD2Q5U5R9 776 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 CLEC18BQ6UXF7 455 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 VN1R4Q7Z5H5 301 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 HPS6Q86YV9 775 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 ANKMY2Q8IV38 441 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 AMER3Q8N944 861 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 CLEC18CQ8NCF0 446 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 OR11G2Q8NGC1 345 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 MCOLN3Q8TDD5 553 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 RERGQ96A58 199 aaPredicted RBP12.65□□□□□ -0.38
CLCC1-202ENST00000348264 PNPLA2Q96AD5 504 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 NACC2Q96BF6 587 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 LRRC39Q96DD0 335 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 CCDC138Q96M89 665 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 PRAP1Q96NZ9 151 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 KRT12Q99456 494 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 OLFM1Q99784 485 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 CRB3Q9BUF7 120 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 ATG10Q9H0Y0 220 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 PARVBQ9HBI1 364 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 ZBTB20Q9HC78 741 aaPredicted RBP12.65□□□□□ -0.38
CLCC1-202ENST00000348264 ATP13A2Q9NQ11 1180 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 SEMA3GQ9NS98 782 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 UTP6Q9NYH9 597 aaKnown RBP12.65□□□□□ -0.38
CLCC1-202ENST00000348264 C5AR2Q9P296 337 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 ZNF282Q9UDV7 671 aaPredicted RBP12.65□□□□□ -0.38
CLCC1-202ENST00000348264 MRPS2Q9Y399 296 aaKnown RBP12.65□□□□□ -0.38
CLCC1-202ENST00000348264 PSAT1Q9Y617 370 aa12.65□□□□□ -0.38
CLCC1-202ENST00000348264 EFCAB8A8MWE9 144 aa12.64□□□□□ -0.39
CLCC1-202ENST00000348264 SLC16A5O15375 505 aa12.64□□□□□ -0.39
CLCC1-202ENST00000348264 FOXS1O43638 330 aa12.64□□□□□ -0.39
CLCC1-202ENST00000348264 ALPPP05187 535 aa12.64□□□□□ -0.39
CLCC1-202ENST00000348264 ITGA3P26006 1051 aa12.64□□□□□ -0.39
CLCC1-202ENST00000348264 PAFAH1B1P43034 410 aa12.64□□□□□ -0.39
CLCC1-202ENST00000348264 OCA2Q04671 838 aa12.64□□□□□ -0.39
CLCC1-202ENST00000348264 PDIA2Q13087 525 aaKnown RBP12.64□□□□□ -0.39
CLCC1-202ENST00000348264 AIMP2Q13155 320 aaKnown RBP12.64□□□□□ -0.39
CLCC1-202ENST00000348264 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
CLCC1-202ENST00000348264 ZXDCQ2QGD7 858 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms