RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 VNN1O95497 513 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 TBX18O95935 607 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 H1F0P07305 194 aaKnown RBP22.51■■□□□ 1.19
NPAS3-201ENST00000346562 TMCO2Q7Z6W1 182 aaPredicted RBP22.51■■□□□ 1.19
NPAS3-201ENST00000346562 IQCKQ8N0W5 287 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 NAT14Q8WUY8 206 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 KHNYNO15037 678 aaKnown RBP22.51■■□□□ 1.19
NPAS3-201ENST00000346562 CDC40O60508 579 aaKnown RBP eCLIP22.51■■□□□ 1.19
NPAS3-201ENST00000346562 BCHEP06276 602 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 PVALBP20472 110 aaPredicted RBP22.51■■□□□ 1.19
NPAS3-201ENST00000346562 RAB39AQ14964 217 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 TMEM126BQ8IUX1 230 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 ZNF101Q8IZC7 436 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 OR4C15Q8NGM1 316 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 PCDHB16Q9NRJ7 776 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 GKN1Q9NS71 199 aa22.51■■□□□ 1.19
NPAS3-201ENST00000346562 IL33O95760 270 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 GRK5P34947 590 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 C4orf46Q504U0 113 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 COMMD3Q9UBI1 195 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 TNFRSF10DQ9UBN6 386 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 OR2AT4A6NND4 320 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 OAS1P00973 400 aaKnown RBP22.5■■□□□ 1.19
NPAS3-201ENST00000346562 SMSP52788 366 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 MAPK15Q8TD08 544 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 KCTD7Q96MP8 289 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 PTGES2Q9H7Z7 377 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 TRNAU1APQ9NX07 287 aaKnown RBP22.5■■□□□ 1.19
NPAS3-201ENST00000346562 AGPSO00116 658 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 OR12D2P58182 307 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 Q6ZVU0 165 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 OR5AK3PQ8NH89 298 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 ZNF224Q9NZL3 707 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 CBLBQ13191 982 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 PDCD4Q53EL6 469 aaKnown RBP22.5■■□□□ 1.19
NPAS3-201ENST00000346562 RBM48Q5RL73 367 aaKnown RBP22.5■■□□□ 1.19
NPAS3-201ENST00000346562 NCBP2-AS2Q69YL0 99 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 LGI4Q8N135 537 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 C1orf52Q8N6N3 182 aaKnown RBP22.5■■□□□ 1.19
NPAS3-201ENST00000346562 CEP76Q8TAP6 659 aa22.5■■□□□ 1.19
NPAS3-201ENST00000346562 HEXBP07686 556 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 KCTD19Q17RG1 926 aaPredicted RBP22.49■■□□□ 1.19
NPAS3-201ENST00000346562 TIGD6Q17RP2 521 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 MND1Q9BWT6 205 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 CXorf21Q9HAI6 301 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 ZIM2Q9NZV7 527 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 CYTH4Q9UIA0 394 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 VEGFDO43915 354 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 MMP20O60882 483 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 POP7O75817 140 aaKnown RBP22.49■■□□□ 1.19
NPAS3-201ENST00000346562 IRF2BP1Q8IU81 584 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 ZNF565Q8N9K5 539 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 NLGN2Q8NFZ4 835 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 OXSMQ9NWU1 459 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 OR51F1A6NGY5 319 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 NRIP1P48552 1158 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 PYCR2Q96C36 320 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 KANTRA0A1W2PQU2 76 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 CLIC1O00299 241 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 KDELR3O43731 214 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 MAZP56270 477 aaKnown RBP22.49■■□□□ 1.19
NPAS3-201ENST00000346562 ARPC4P59998 168 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 RUNDC3AQ59EK9 446 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 RAB2BQ8WUD1 216 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 IRF7Q92985 503 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 BRD7Q9NPI1 651 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 EFCAB9A8MZ26 197 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 ENTPD6O75354 484 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 DUSP3P51452 185 aaPredicted RBP22.49■■□□□ 1.19
NPAS3-201ENST00000346562 SPIN3Q5JUX0 258 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 ZNF227Q86WZ6 799 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 OR4E2Q8NGC2 313 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 UCK2Q9BZX2 261 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 RBPJLQ9UBG7 517 aa22.49■■□□□ 1.19
NPAS3-201ENST00000346562 E7EQ34 232 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 CLPXO76031 633 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 SYN1P17600 705 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 BMP8BP34820 402 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 TEAD2Q15562 447 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 SYPL2Q5VXT5 272 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 BMP8AQ7Z5Y6 402 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 METTL8Q9H825 291 aaKnown RBP22.48■■□□□ 1.19
NPAS3-201ENST00000346562 PPM1HQ9ULR3 514 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 PCDHB3Q9Y5E6 796 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 PPEF2O14830 753 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 CYP11A1P05108 521 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 UNGP13051 313 aaPredicted RBP22.48■■□□□ 1.19
NPAS3-201ENST00000346562 HK1P19367 917 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 FMO3P31513 532 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 INO80EQ8NBZ0 244 aaPredicted RBP22.48■■□□□ 1.19
NPAS3-201ENST00000346562 CDKN2AIPNLQ96HQ2 116 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 ORAI3Q9BRQ5 295 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 TRPV4Q9HBA0 871 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 CLDN25C9JDP6 229 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 SLC5A11Q8WWX8 675 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 SMOC2Q9H3U7 446 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 GRHPRQ9UBQ7 328 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 AQP12BA6NM10 295 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 JMJD7P0C870 316 aa22.48■■□□□ 1.19
NPAS3-201ENST00000346562 SELENOVP59797 346 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms