RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 THAP5Q7Z6K1 395 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 EDAQ92838 391 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 FBXL20Q96IG2 436 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 DHRS4Q9BTZ2 278 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 EPB41L1Q9H4G0 881 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 PAPPAQ13219 1627 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 A0A1W2PP55 124 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 HYKKA2RU49 373 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 PIRO00625 290 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 HLA-EP13747 358 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF823P16415 610 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 IMPDH1P20839 514 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 RASGEF1BQ0VAM2 473 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 DGUOKQ16854 277 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 MRPL38Q96DV4 380 aaKnown RBP10.59□□□□□ -0.71
CLCN6-202ENST00000346436 GPER1Q99527 375 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 SGIP1Q9BQI5 828 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 CHID1Q9BWS9 393 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 HRASLS2Q9NWW9 162 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 PDE4DIPQ5VU43 2346 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 A0A1W2PQU0 124 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 DCLK1O15075 740 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 GSRP00390 522 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 SERPINA3P01011 423 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 ALOX5P09917 674 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 ARSFP54793 590 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 PLP2Q04941 152 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 DECR1Q16698 335 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF805Q5CZA5 627 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 PRAMEF14Q5SWL7 426 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 PRAMEF13Q5VWM6 474 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 CROCCP3Q8IVE0 287 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.59□□□□□ -0.71
CLCN6-202ENST00000346436 CLEC1AQ8NC01 280 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 PIK3C3Q8NEB9 887 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF671Q8TAW3 534 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 SLC22A8Q8TCC7 542 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 ZBED6CLQ96FA7 236 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-202ENST00000346436 ZSWIM3Q96MP5 696 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 SMOC2Q9H3U7 446 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 SEC14L3Q9UDX4 400 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 C3orf18Q9UK00 162 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 IRGMA1A4Y4 181 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 FAM25AB3EWG3 89 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 FAM25CB3EWG5 89 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 FAM25GB3EWG6 89 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 CDC7O00311 574 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 NBNO60934 754 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 RBMXL2O75526 392 aaKnown RBP10.59□□□□□ -0.71
CLCN6-202ENST00000346436 SLC35E2BP0CK96 405 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 CLUP10909 449 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 SLC26A3P40879 764 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 KHKP50053 298 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 PSMD7P51665 324 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 DGKQP52824 942 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 HERVK_113P63132 956 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 RHAGQ02094 409 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 NSUN5Q96P11 429 aaKnown RBP10.59□□□□□ -0.71
CLCN6-202ENST00000346436 ERVK-6Q9BXR3 956 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 ATG10Q9H0Y0 220 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 TMEM165Q9HC07 324 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 Q9N2J8 555 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 STMN3Q9NZ72 180 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 SAMHD1Q9Y3Z3 626 aaKnown RBP10.59□□□□□ -0.71
CLCN6-202ENST00000346436 STON1Q9Y6Q2 735 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 ARPC2O15144 300 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 THEGLP0DJG4 465 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 RRADP55042 308 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 LRRC73Q5JTD7 316 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 ADAMTS18Q8TE60 1221 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 KBTBD7Q8WVZ9 684 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 HSPBAP1Q96EW2 488 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 APOLD1Q96LR9 279 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 WDR83Q9BRX9 315 aaKnown RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 GALPQ9UBC7 116 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 CITO14578 2027 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 BTAF1O14981 1849 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 IGKV6-21A0A0C4DH24 114 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 UGT2B17O75795 530 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 MRPS21P82921 87 aaKnown RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 EPS8Q12929 822 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 CHIT1Q13231 466 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 HSF5Q4G112 596 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 SLC8B1Q6J4K2 584 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 SPATA19Q7Z5L4 167 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 PROSER1Q86XN7 944 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 ACVR1CQ8NER5 493 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 GPR151Q8TDV0 419 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 THUMPD1Q9NXG2 353 aaKnown RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 MAGEL2Q9UJ55 1249 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 PRAMEF26H0Y7S4 382 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 SCDO00767 359 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 BCAS2O75934 225 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 ANXA4P09525 319 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 ADSLP30566 484 aaPredicted RBP10.58□□□□□ -0.72
CLCN6-202ENST00000346436 MERTKQ12866 999 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 TRAF3Q13114 568 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 CST6Q15828 149 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 MS4A13Q5J8X5 152 aa10.58□□□□□ -0.72
CLCN6-202ENST00000346436 ERICH5Q6P6B1 374 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms