RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 IMPA1P29218 277 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 KCNK10P57789 538 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 CDK3Q00526 305 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 GRIK2Q13002 908 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 FGL2Q14314 439 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 PTGR1Q14914 329 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 PON2Q15165 354 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 IMPG1Q17R60 797 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 TIGD2Q4W5G0 525 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 TMEM196Q5HYL7 178 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 AAGABQ6PD74 315 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 AGTRAPQ6RW13 159 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 C11orf96Q7Z7L8 435 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 PDZD3Q86UT5 571 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 THOC6Q86W42 341 aaKnown RBP8.94□□□□□ -0.98
ATG4A-202ENST00000345734 RNF175Q8N4F7 328 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 CHCHD4Q8N4Q1 142 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 L3MBTL4Q8NA19 623 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 SMRP1Q8NCR6 262 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 BHLHE22Q8NFJ8 381 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-202ENST00000345734 JADE3Q92613 823 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 ROPN1LQ96C74 230 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 DHRS1Q96LJ7 313 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 CCDC138Q96M89 665 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 TRAPPC9Q96Q05 1148 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 OR4K3Q96R72 315 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 ACPTQ9BZG2 426 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 TRIM8Q9BZR9 551 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 SPAG4Q9NPE6 437 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 TM7SF3Q9NS93 570 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 SLAMF8Q9P0V8 285 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 CD300AQ9UGN4 299 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 ANGPTL2Q9UKU9 493 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 PAIP2BQ9ULR5 123 aaKnown RBP8.94□□□□□ -0.98
ATG4A-202ENST00000345734 ZFR2Q9UPR6 939 aaKnown RBP8.94□□□□□ -0.98
ATG4A-202ENST00000345734 NUP214P35658 2090 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-202ENST00000345734 FAM234BA2RU67 622 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 CCDC154A6NI56 674 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 H3BNX3 289 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 KLF4O43474 513 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 AP1G1O43747 822 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 VEGFDO43915 354 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 SEC22BO75396 215 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 BCAS2O75934 225 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 PAK4O96013 591 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 KRT6AP02538 564 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 KRT6BP04259 564 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 CD22P20273 847 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 NTSR1P30989 418 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 BMP8BP34820 402 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 VHLP40337 213 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 HALP42357 657 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 CASP2P42575 452 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 GNPDA1P46926 289 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 KRT6CP48668 564 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 PHEXP78562 749 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 CHIT1Q13231 466 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 ADGRE1Q14246 886 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 CLPPQ16740 277 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 GGTA1PQ4G0N0 100 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 ZNF776Q68DI1 518 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 C1orf229Q6ZS94 237 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 RNF165Q6ZSG1 346 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 TRMT11Q7Z4G4 463 aaKnown RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 ZFAND4Q86XD8 727 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 OR2T3Q8NH03 318 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 OR2L2Q8NH16 312 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 GANCQ8TET4 914 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 SELENOMQ8WWX9 145 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 LRRC58Q96CX6 371 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 LINC00615Q96LM1 132 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 FOPNLQ96NB1 174 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 COL25A1Q9BXS0 654 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 OSBPL6Q9BZF3 934 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 ELOVL6Q9H5J4 265 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 LRTM1Q9HBL6 345 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 NMRK1Q9NWW6 199 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 FBXL12Q9NXK8 326 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 SLC23A2Q9UGH3 650 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 CYP8B1Q9UNU6 501 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 COL4A2P08572 1712 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 E7EQ34 232 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 H3BQ06 376 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 NME4O00746 187 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 DNAJA2O60884 412 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 EEDO75530 441 aaKnown RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 DGKQP52824 942 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 MRPS22P82650 360 aaKnown RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 INPP5AQ14642 412 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 IRF4Q15306 451 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 SLC2A7Q6PXP3 512 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 SUSD1Q6UWL2 747 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 LIX1Q8N485 282 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 IL17RCQ8NAC3 791 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 CLHC1Q8NHS4 586 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 ZNF514Q96K75 400 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-202ENST00000345734 ZNF570Q96NI8 536 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 GABRG3Q99928 467 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 CMTM6Q9NX76 183 aa8.93□□□□□ -0.98
ATG4A-202ENST00000345734 SUCOQ9UBS9 1254 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms