RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 CD244Q9BZW8 370 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 DNAJC11Q9NVH1 559 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 SIDT1Q9NXL6 827 aaKnown RBP11.37□□□□□ -0.59
SNCA-202ENST00000345009 GPRC5BQ9NZH0 403 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 CPSF2Q9P2I0 782 aaKnown RBP11.37□□□□□ -0.59
SNCA-202ENST00000345009 OPTCQ9UBM4 332 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 DKK4Q9UBT3 224 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 MID2Q9UJV3 735 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 PTBP2Q9UKA9 531 aaKnown RBP11.37□□□□□ -0.59
SNCA-202ENST00000345009 SLC22A14Q9Y267 594 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 AKAP13Q12802 2813 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 A0A1W2PPM1 405 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 E7EQ34 232 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 CCNT2O60583 730 aaKnown RBP11.36□□□□□ -0.59
SNCA-202ENST00000345009 KATNA1O75449 491 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 OR2B3O76000 313 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 CCNYL3P0C7X3 344 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 EPB42P16452 691 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 SLC5A2P31639 672 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 CRHR1P34998 444 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 GMPRP36959 345 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 SLC6A12P48065 614 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 KCNC1P48547 511 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 HSPA7P48741 367 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 ZNF844Q08AG5 666 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 CDC16Q13042 620 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 GPR19Q15760 415 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 PDK4Q16654 411 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 TBC1D25Q3MII6 688 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 TECRLQ5HYJ1 363 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 TLDC1Q6P9B6 456 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 CDHR3Q6ZTQ4 885 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 LRRC70Q7Z2Q7 622 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 HDXQ7Z353 690 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 TMEM126BQ8IUX1 230 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 FAM20CQ8IXL6 584 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 SRRM1Q8IYB3 904 aaKnown RBP11.36□□□□□ -0.59
SNCA-202ENST00000345009 KLHDC8AQ8IYD2 350 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 CYP4X1Q8N118 509 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 DNAJC22Q8N4W6 341 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 ZNF655Q8N720 491 aaPredicted RBP11.36□□□□□ -0.59
SNCA-202ENST00000345009 SNX31Q8N9S9 440 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 MZB1Q8WU39 189 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 SLC5A11Q8WWX8 675 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 PRR11Q96HE9 360 aaPredicted RBP11.36□□□□□ -0.59
SNCA-202ENST00000345009 ZIM3Q96PE6 472 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 ZFYVE21Q9BQ24 234 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 SELENOSQ9BQE4 189 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 NLNQ9BYT8 704 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 EURLQ9NYK6 297 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 XPR1Q9UBH6 696 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 KLHL20Q9Y2M5 609 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 APC2O95996 2303 aa11.36□□□□□ -0.59
SNCA-202ENST00000345009 URB1O60287 2271 aaKnown RBP11.35□□□□□ -0.59
SNCA-202ENST00000345009 A0A1W2PNU3 283 aaPredicted RBP11.35□□□□□ -0.59
SNCA-202ENST00000345009 OR2A25A4D2G3 310 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 CDRT15L2A8MXV6 281 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 STMND1H3BQB6 276 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 STX16-NPEPL1H3BU86 382 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 K7EPI3 171 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 STX16O14662 325 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 KLK8O60259 260 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 PRAMEF10O60809 474 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 CDH1P12830 882 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 MTHFD2P13995 350 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 ETV5P41161 510 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 PCBP4P57723 403 aaKnown RBP11.35□□□□□ -0.59
SNCA-202ENST00000345009 NAA20P61599 178 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 RPS15AP62244 130 aaKnown RBP11.35□□□□□ -0.59
SNCA-202ENST00000345009 SLC18A2Q05940 514 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 SETDB1Q15047 1291 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 ZIC1Q15915 447 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 HIST2H2ACQ16777 129 aaPredicted RBP11.35□□□□□ -0.59
SNCA-202ENST00000345009 FAM214AQ32MH5 1076 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 PAGE2BQ5JRK9 111 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 YOD1Q5VVQ6 348 aaPredicted RBP11.35□□□□□ -0.59
SNCA-202ENST00000345009 FCRL6Q6DN72 434 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 HIST2H2AA3Q6FI13 130 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 ZNF425Q6IV72 752 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 UNQ6494/PRO21346Q6UXR6 183 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 TRABD2AQ86V40 505 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 SLC22A9Q8IVM8 553 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 KRT78Q8N1N4 520 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 CCDC63Q8NA47 563 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 ABHD11Q8NFV4 315 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 UBTD2Q8WUN7 234 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 SREK1Q8WXA9 508 aaKnown RBP11.35□□□□□ -0.59
SNCA-202ENST00000345009 GATA6Q92908 595 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 ZNF501Q96CX3 271 aaPredicted RBP11.35□□□□□ -0.59
SNCA-202ENST00000345009 PGM2Q96G03 612 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 CTRCQ99895 268 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 AIF1LQ9BQI0 150 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 NDC1Q9BTX1 674 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 ULBP3Q9BZM4 244 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 PITHD1Q9GZP4 211 aaPredicted RBP11.35□□□□□ -0.59
SNCA-202ENST00000345009 PELI2Q9HAT8 420 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 FAM60AQ9NP50 221 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 SLC6A20Q9NP91 592 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 ASCL3Q9NQ33 180 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 ZNF358Q9NW07 568 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms