RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 C6orf136Q5SQH8 315 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 KCTD13Q8WZ19 329 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 LGR4Q9BXB1 951 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 SLC32A1Q9H598 525 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 IFT52Q9Y366 437 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 RIPK3Q9Y572 518 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 PRAMEF12O95522 483 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 SMAD3P84022 425 aaKnown RBP17.6■□□□□ 0.41
SMC4-201ENST00000344722 PRR5P85299 388 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 DGKZQ13574 1117 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 GRB14Q14449 540 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 Q8N402 240 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 DHRS4Q9BTZ2 278 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 TP63Q9H3D4 680 aaPredicted RBP17.6■□□□□ 0.41
SMC4-201ENST00000344722 ITGA10O75578 1167 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 ARL6IP5O75915 188 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 TFAP2AP05549 437 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 TUSC3Q13454 348 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 CYBRD1Q53TN4 286 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 MEDAGQ5VYS4 303 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 SMARCD3Q6STE5 483 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 NATD1Q8N6N6 113 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 ACOT12Q8WYK0 555 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 FOLH1BQ9HBA9 442 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 MEMO1Q9Y316 297 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 PEAK1Q9H792 1746 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 TRAV6A0A075B6T7 132 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 FUT4P22083 530 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 NOMO2Q5JPE7 1267 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 FAAH2Q6GMR7 532 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 NAPRTQ6XQN6 538 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 TMC8Q8IU68 726 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 ZNF248Q8NDW4 579 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 ZNF548Q8NEK5 533 aaPredicted RBP17.6■□□□□ 0.41
SMC4-201ENST00000344722 KAT2AQ92830 837 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 ZBED6CLQ96FA7 236 aaPredicted RBP17.6■□□□□ 0.41
SMC4-201ENST00000344722 CORO1BQ9BR76 489 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 AIG1Q9NVV5 245 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 CPA4Q9UI42 421 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 HK1P19367 917 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 CAMK1Q14012 370 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 C10orf62Q5T681 223 aaPredicted RBP17.59■□□□□ 0.41
SMC4-201ENST00000344722 EIF5AL1Q6IS14 154 aaKnown RBP17.59■□□□□ 0.41
SMC4-201ENST00000344722 SNX20Q7Z614 316 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 ZNF285Q96NJ3 590 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 ZNF599Q96NL3 588 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 C1QTNF7Q9BXJ2 289 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 KCNH6Q9H252 994 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 TPT1P8Q9HAU6 139 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 NUDT15Q9NV35 164 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 EVLQ9UI08 416 aaPredicted RBP17.59■□□□□ 0.41
SMC4-201ENST00000344722 TLX2O43763 284 aaPredicted RBP17.59■□□□□ 0.41
SMC4-201ENST00000344722 SLC35E2BP0CK96 405 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 GRB7Q14451 532 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 UGT8Q16880 541 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 SPIN4Q56A73 249 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 TNFAIP8L2Q6P589 184 aaPredicted RBP17.59■□□□□ 0.41
SMC4-201ENST00000344722 ZSWIM9Q86XI8 627 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 CFAP206Q8IYR0 622 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 RANBP9Q96S59 729 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 TTLL2Q9BWV7 592 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 RIMS3Q9UJD0 308 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 EBLN1P0CF75 366 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 CDK6Q00534 326 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 OR7D4Q8NG98 312 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 MTERF1Q99551 399 aaKnown RBP17.59■□□□□ 0.41
SMC4-201ENST00000344722 ELL3Q9HB65 397 aaPredicted RBP17.59■□□□□ 0.41
SMC4-201ENST00000344722 MGAT4BQ9UQ53 548 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 TRAV19A0A0A6YYK7 116 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 C9IYK1 514 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 CHP2O43745 196 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 ACSL4O60488 711 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 DSG2Q14126 1118 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 WDR45BQ5MNZ6 344 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 FRG2Q64ET8 278 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 LILRB4Q8NHJ6 448 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 COQ8AQ8NI60 647 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 FRG2BQ96QU4 278 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 PKP4Q99569 1192 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 MGLLQ99685 303 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 BTBD1Q9H0C5 482 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 XKR8Q9H6D3 395 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 CLCA3PQ9Y6N3 262 aa17.59■□□□□ 0.41
SMC4-201ENST00000344722 IRAK2O43187 625 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 ELFN1P0C7U0 828 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 DNASE1P24855 282 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 RBBP4Q09028 425 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 EFR3AQ14156 821 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 ZNF630Q2M218 657 aaPredicted RBP17.58■□□□□ 0.41
SMC4-201ENST00000344722 ANKRD26P1Q6NSI1 321 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 CLEC20AQ6ZU45 233 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 MFSD2AQ8NA29 543 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 CHST4Q8NCG5 386 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 GPR152Q8TDT2 470 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 CHPT1Q8WUD6 406 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 FERD3LQ96RJ6 166 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 TRPV4Q9HBA0 871 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 SRRDQ9UH36 339 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 ZNF639Q9UID6 485 aa17.58■□□□□ 0.41
SMC4-201ENST00000344722 ZNF510Q9Y2H8 683 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms