RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 SP8Q8IXZ3 490 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 ZZZ3Q8IYH5 903 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 CHPFQ8IZ52 775 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 PTGR2Q8N8N7 351 aaPredicted RBP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 OR52H1Q8NGJ2 320 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 PIWIL1Q96J94 861 aaKnown RBP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 HRASLS5Q96KN8 279 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 PPM1MQ96MI6 270 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 TBL1YQ9BQ87 522 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 TSEN34Q9BSV6 310 aaKnown RBP7.9□□□□□ -1.14
ATG4A-201ENST00000343524 PIF1Q9H611 641 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 ALG9Q9H6U8 611 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 HEBP1Q9NRV9 189 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 MCUBQ9NWR8 336 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 IKZF3Q9UKT9 509 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 ASB4Q9Y574 426 aa7.9□□□□□ -1.14
ATG4A-201ENST00000343524 WDR81Q562E7 1941 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 RPS10-NUDT3A0A1W2PQS6 291 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 FABP12A6NFH5 140 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 C9JVG2 144 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 DFFAO00273 331 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ZBTB24O43167 697 aaPredicted RBP7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ACSL4O60488 711 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 DPM1O60762 260 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 CREG1O75629 220 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 STAU1O95793 577 aaKnown RBP7.9□□□□□ -1.15
ATG4A-201ENST00000343524 SERPINA1P01009 418 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 APOC1P02654 83 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 PROS1P07225 676 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 CNPP09543 421 aaKnown RBP7.9□□□□□ -1.15
ATG4A-201ENST00000343524 CSF3P09919 207 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 TSPAN19P0C672 248 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ZNF250P15622 560 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ARSBP15848 533 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 PFKLP17858 780 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ITGALP20701 1170 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 PRKACGP22612 351 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 AZGP1P25311 298 aaKnown RBP7.9□□□□□ -1.15
ATG4A-201ENST00000343524 KIR2DL3P43628 341 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 DAPP51397 102 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 BCAT1P54687 386 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ABRQ12979 859 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 NPRL3Q12980 569 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 CAMK2GQ13555 558 aaPredicted RBP7.9□□□□□ -1.15
ATG4A-201ENST00000343524 IRF3Q14653 427 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 NKG7Q16617 165 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 PRSS36Q5K4E3 855 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ATG9BQ674R7 924 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 TFAP2EQ6VUC0 442 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ZNF605Q86T29 641 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ASPGQ86U10 573 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 CYP4Z1Q86W10 505 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 TIGD4Q8IY51 512 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ENTHD1Q8IYW4 607 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 SAMD14Q8IZD0 417 aaPredicted RBP7.9□□□□□ -1.15
ATG4A-201ENST00000343524 PGBD3Q8N328 593 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 FAM86B1Q8N7N1 296 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 CLDN22Q8N7P3 220 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ATG16L2Q8NAA4 619 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 SRFBP1Q8NEF9 429 aaKnown RBP7.9□□□□□ -1.15
ATG4A-201ENST00000343524 DENND6BQ8NEG7 585 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 BCL7CQ8WUZ0 217 aaPredicted RBP7.9□□□□□ -1.15
ATG4A-201ENST00000343524 DNASE1L2Q92874 299 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 COPS5Q92905 334 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 EXOC2Q96KP1 924 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ZDHHC15Q96MV8 337 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 MARVELD1Q9BSK0 173 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 MRIQ9BWK5 157 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 CDCA4Q9BXL8 241 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ASPNQ9BXN1 380 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 CARS2Q9HA77 564 aaKnown RBP7.9□□□□□ -1.15
ATG4A-201ENST00000343524 CNOT2Q9NZN8 540 aaKnown RBP7.9□□□□□ -1.15
ATG4A-201ENST00000343524 ENOPH1Q9UHY7 261 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 MUTYHQ9UIF7 546 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 RIMKLBQ9ULI2 386 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 PCDHGB7Q9Y5F8 929 aa7.9□□□□□ -1.15
ATG4A-201ENST00000343524 PCM1Q15154 2024 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 FAM240BA0A1B0GVZ2 78 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 A8MUA0 341 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 KCNK1O00180 336 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 DCLK1O15075 740 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 MITFO75030 526 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-201ENST00000343524 FGF18O76093 207 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 APOL3O95236 402 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 IL1AP01583 271 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 F7P08709 466 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-201ENST00000343524 OR56A5P0C7T3 313 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 ANXA3P12429 323 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 SLC2A4P14672 509 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 ZNF37AP17032 561 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-201ENST00000343524 EVI2BP34910 448 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 GRK5P34947 590 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 GGT2P36268 569 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 INPP1P49441 399 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 GEMP55040 296 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 PRMT2P55345 433 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 ITGA1P56199 1179 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 YBX1P67809 324 aaKnown RBP7.89□□□□□ -1.15
ATG4A-201ENST00000343524 CREMQ03060 361 aa7.89□□□□□ -1.15
ATG4A-201ENST00000343524 MAD2L1Q13257 205 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms