RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 MTMR11A4FU01 709 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 DYRK3O43781 588 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 PRMT3O60678 531 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 TSPAN12O95859 305 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 CBSLP0DN79 551 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 IL1RNP18510 177 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 CBSP35520 551 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 NUDT6P53370 316 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 CDH12P55289 794 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 RPS3AP61247 264 aaKnown RBP9.16□□□□□ -0.94
TRERF1-201ENST00000340840 TIAL1Q01085 375 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRERF1-201ENST00000340840 NFATC2Q13469 925 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 CHRNA6Q15825 494 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 FXNQ16595 210 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 IFI44LQ53G44 452 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 THOC7Q6I9Y2 204 aaKnown RBP9.16□□□□□ -0.94
TRERF1-201ENST00000340840 SBSNQ6UWP8 590 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 SLC16A12Q6ZSM3 486 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 PTCHD4Q6ZW05 846 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 VTCN1Q7Z7D3 282 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 CYP4Z1Q86W10 505 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 BEND7Q8N7W2 519 aaPredicted RBP9.16□□□□□ -0.94
TRERF1-201ENST00000340840 OR52J3Q8NH60 311 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 TRIM63Q969Q1 353 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 RHBDF1Q96CC6 855 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 DUSP26Q9BV47 211 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 EMILIN2Q9BXX0 1053 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 TPT1P8Q9HAU6 139 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 INIPQ9NRY2 104 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 POFUT2Q9Y2G5 429 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 PRRG1O14668 218 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 NUAK1O60285 661 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 RPS3P23396 243 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRERF1-201ENST00000340840 SLC15A1P46059 708 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 CLCN7P51798 805 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 OR2B6P58173 313 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 SMAD3P84022 425 aaKnown RBP9.16□□□□□ -0.94
TRERF1-201ENST00000340840 GPR17Q13304 367 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 EIF4EBP2Q13542 120 aaPredicted RBP9.16□□□□□ -0.94
TRERF1-201ENST00000340840 NKG7Q16617 165 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 C6orf183Q5T699 404 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 RAB43Q86YS6 212 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 TTC9BQ8N6N2 239 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 WDR36Q8NI36 951 aaKnown RBP9.16□□□□□ -0.94
TRERF1-201ENST00000340840 CLP1Q92989 425 aaKnown RBP9.16□□□□□ -0.94
TRERF1-201ENST00000340840 PKMYT1Q99640 499 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 MYOCQ99972 504 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 PSD2Q9BQI7 771 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 ATG10Q9H0Y0 220 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 OGDHLQ9ULD0 1010 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 PCDHGB1Q9Y5G3 927 aa9.16□□□□□ -0.94
TRERF1-201ENST00000340840 AGAP5A6NIR3 686 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 JRKO75564 520 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 CATP04040 527 aaKnown RBP9.15□□□□□ -0.94
TRERF1-201ENST00000340840 EFNA1P20827 205 aaPredicted RBP9.15□□□□□ -0.94
TRERF1-201ENST00000340840 GTF2E2P29084 291 aaKnown RBP9.15□□□□□ -0.94
TRERF1-201ENST00000340840 DSC3Q14574 896 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 CBX2Q14781 532 aaPredicted RBP9.15□□□□□ -0.94
TRERF1-201ENST00000340840 SMN1Q16637 294 aaKnown RBP9.15□□□□□ -0.94
TRERF1-201ENST00000340840 PDZK1Q5T2W1 519 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 HIST2H2AA3Q6FI13 130 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 NOXRED1Q6NXP6 359 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 PNCKQ6P2M8 343 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 TRIM40Q6P9F5 258 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 CCBE1Q6UXH8 406 aaPredicted RBP9.15□□□□□ -0.94
TRERF1-201ENST00000340840 CASP12Q6UXS9 341 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 BTLAQ7Z6A9 289 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 SERPINA11Q86U17 422 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 BBS7Q8IWZ6 715 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 DYNC2LI1Q8TCX1 351 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 TRIB2Q92519 343 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 TADA1Q96BN2 335 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 PYCR2Q96C36 320 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 Q96MT0 163 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 IKZF5Q9H5V7 419 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 CERS4Q9HA82 394 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 UTS2RQ9UKP6 389 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 PLXNA1Q9UIW2 1896 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 POLR2AP24928 1970 aaKnown RBP9.15□□□□□ -0.94
TRERF1-201ENST00000340840 MPZL2O60487 215 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 ACRP10323 421 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 JUNDP17535 347 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 DDX5P17844 614 aaKnown RBP9.15□□□□□ -0.94
TRERF1-201ENST00000340840 GADD45AP24522 165 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 HNMTP50135 292 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 MLLT10P55197 1068 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 PLD1Q13393 1074 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 DEPDC1Q5TB30 811 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 SUSD1Q6UWL2 747 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 CHRDL2Q6WN34 429 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 UTS2BQ765I0 119 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 TRIM46Q7Z4K8 759 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 ZSWIM9Q86XI8 627 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 LACC1Q8IV20 430 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 LGI4Q8N135 537 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 OR4A15Q8NGL6 344 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 ZNF675Q8TD23 568 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 C2orf15Q8WU43 125 aaKnown RBP9.15□□□□□ -0.94
TRERF1-201ENST00000340840 FKBP10Q96AY3 582 aa9.15□□□□□ -0.94
TRERF1-201ENST00000340840 GAS2L1Q99501 681 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms