RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 NBEAQ8NFP9 2946 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 MDC1Q14676 2089 aaKnown RBP18.35■□□□□ 0.53
SYNE4-202ENST00000340477 IGKV1-8A0A0C4DH67 115 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 EXOC1LA0A1B0GW35 172 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 HYKKA2RU49 373 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 CDC14CA4D256 554 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 FITM1A5D6W6 292 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 H0YGG7 62 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 HAT1O14929 419 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 NKX2-8O15522 239 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 ZNF500O60304 480 aaPredicted RBP18.35■□□□□ 0.53
SYNE4-202ENST00000340477 KRT38O76015 456 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 WISP3O95389 354 aaPredicted RBP18.35■□□□□ 0.53
SYNE4-202ENST00000340477 RECKO95980 971 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 CTSBP07858 339 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 ATXN8OSP0DMR3 200 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 CD1DP15813 335 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 SLC26A3P40879 764 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 CCR8P51685 355 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 ARF3P61204 181 aaPredicted RBP18.35■□□□□ 0.53
SYNE4-202ENST00000340477 BMPR2Q13873 1038 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 MUM1Q2TAK8 710 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 NKAIN1Q4KMZ8 207 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 BORAQ6PGQ7 559 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 FAM198BQ6UWH4 519 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 SPATA6LQ8N4H0 392 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 LSM14AQ8ND56 463 aaKnown RBP18.35■□□□□ 0.53
SYNE4-202ENST00000340477 SLC44A1Q8WWI5 657 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 PYCR2Q96C36 320 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 THAP11Q96EK4 314 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 WBP1Q96G27 269 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 PAFAH2Q99487 392 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 UNKQ9C0B0 810 aaKnown RBP18.35■□□□□ 0.53
SYNE4-202ENST00000340477 AKIRIN1Q9H9L7 192 aaPredicted RBP18.35■□□□□ 0.53
SYNE4-202ENST00000340477 STARD5Q9NSY2 213 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 WWOXQ9NZC7 414 aa18.35■□□□□ 0.53
SYNE4-202ENST00000340477 NCF1BA6NI72 391 aaPredicted RBP18.34■□□□□ 0.53
SYNE4-202ENST00000340477 NCF1CA8MVU1 366 aaPredicted RBP18.34■□□□□ 0.53
SYNE4-202ENST00000340477 POC1B-GALNT4F8VUJ3 575 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 ATXN7O15265 892 aaPredicted RBP18.34■□□□□ 0.53
SYNE4-202ENST00000340477 NRP2O60462 931 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 IPO13O94829 963 aaKnown RBP18.34■□□□□ 0.53
SYNE4-202ENST00000340477 ABHD2P08910 425 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 LTA4HP09960 611 aaKnown RBP18.34■□□□□ 0.53
SYNE4-202ENST00000340477 SLC35E2BP0CK96 405 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 CDH1P12830 882 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 NCF1P14598 390 aaPredicted RBP18.34■□□□□ 0.53
SYNE4-202ENST00000340477 CNTFP26441 200 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 TYK2P29597 1187 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 PMS2P54278 862 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 ERV3-1Q14264 604 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 TGFBIQ15582 683 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 FAM83EQ2M2I3 478 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 CDKL4Q5MAI5 379 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 MLIPQ5VWP3 458 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 FBXO42Q6P3S6 717 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 KLC3Q6P597 504 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 EIF1ADQ8N9N8 165 aaKnown RBP18.34■□□□□ 0.53
SYNE4-202ENST00000340477 STAG3L4Q8TBR4 150 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 KIAA1191Q96A73 305 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 UBXN10Q96LJ8 280 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 ENAMQ9NRM1 1142 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 SNX15Q9NRS6 342 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 CD274Q9NZQ7 290 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 POLHQ9Y253 713 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 KCNE2Q9Y6J6 123 aa18.34■□□□□ 0.53
SYNE4-202ENST00000340477 SEC16AO15027 2179 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 LOC105369274A0A096LPK9 316 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 LOC102723532A0A0G2JNH3 316 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 PRPF4O43172 522 aaKnown RBP eCLIP18.33■□□□□ 0.52
SYNE4-202ENST00000340477 CCR10P46092 362 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 EMP3P54852 163 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 RPS18P62269 152 aaKnown RBP18.33■□□□□ 0.52
SYNE4-202ENST00000340477 NDUFA9Q16795 377 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 LGSNQ5TDP6 509 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 GARNL3Q5VVW2 1013 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 ZNF385CQ66K41 422 aaPredicted RBP18.33■□□□□ 0.52
SYNE4-202ENST00000340477 SULT1C3Q6IMI6 304 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 PRMT9Q6P2P2 845 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 THOC6Q86W42 341 aaKnown RBP18.33■□□□□ 0.52
SYNE4-202ENST00000340477 OR4N4Q8N0Y3 316 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 CNPY4Q8N129 248 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 LRRN4CLQ8ND94 238 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 UHMK1Q8TAS1 419 aaKnown RBP18.33■□□□□ 0.52
SYNE4-202ENST00000340477 SLC5A11Q8WWX8 675 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 TTC9Q92623 222 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 EXTL1Q92935 676 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 EXT2Q93063 718 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 TSNARE1Q96NA8 513 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 TCFL5Q9UL49 500 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 CDC14AQ9UNH5 594 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 IGSF10Q6WRI0 2623 aa18.33■□□□□ 0.52
SYNE4-202ENST00000340477 FER1L5A0AVI2 2057 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 CCDC189A1A4V9 331 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 ESPNB1AK53 854 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 WDR47O94967 919 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 NPPBP16860 134 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 TFEBP19484 476 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 FOLR3P41439 243 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 CSNK1G2P78368 415 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms